RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GZMMP51124 257 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 SESN3P58005 492 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 STXBP1P61764 594 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 TRA2BP62995 288 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 RHDQ02161 417 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 FRMPD2BQ6IN97 320 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 ARMC6Q6NXE6 501 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 RNF44Q7L0R7 432 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 CALHM3Q86XJ0 350 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 OR8K5Q8NH50 307 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 OR10A6Q8NH74 314 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 ZCCHC14Q8WYQ9 949 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 NCSTNQ92542 709 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 GAL3ST3Q96A11 431 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 THAP11Q96EK4 314 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 RSRC1Q96IZ7 334 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 KCNC2Q96PR1 638 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 SH3GL1Q99961 368 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 ZFYVE21Q9BQ24 234 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 ECSITQ9BQ95 431 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 NUDT22Q9BRQ3 303 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 MUC13Q9H3R2 512 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 AKAP7Q9P0M2 348 aaPredicted RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 PCDHB3Q9Y5E6 796 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 SCN3AQ9NY46 2000 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 LOC105369274A0A096LPK9 316 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 LOC102723532A0A0G2JNH3 316 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 C1orf226A1L170 272 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 ZCCHC18P0CG32 403 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 NCK1P16333 377 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 HIST1H1TP22492 207 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 SOX11P35716 441 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 CAPZBP47756 277 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 PTDSS1P48651 473 aaKnown RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 PDX1P52945 283 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 RAB8AP61006 207 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 GABREP78334 506 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 ZFP36L1Q07352 338 aaKnown RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 RGS1Q08116 209 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 EIF3IQ13347 325 aaKnown RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 GAB1Q13480 694 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 C3orf38Q5JPI3 329 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 ZNF551Q7Z340 670 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 OR4N4Q8N0Y3 316 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 ZCCHC7Q8N3Z6 543 aaKnown RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 ACOT4Q8N9L9 421 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 FAM47BQ8NA70 645 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 OR4D9Q8NGE8 314 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 GOT1L1Q8NHS2 421 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 UCN3Q969E3 161 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 LIN37Q96GY3 246 aaPredicted RBP16.52■□□□□ 0.24
SRSF1-201ENST00000258962 TBCDQ9BTW9 1192 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 TRIM15Q9C019 465 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 SEMA6CQ9H3T2 930 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 MIEF1Q9NQG6 463 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 AP3M1Q9Y2T2 418 aa16.52■□□□□ 0.24
SRSF1-201ENST00000258962 SCELO95171 688 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 BAG2O95816 211 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 C6orf47O95873 294 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 FAM58BPP0C7Q3 252 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SLC35G6P0C7Q6 338 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF888P0CJ79 500 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 ST6GAL1P15907 406 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 CERS1P27544 350 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 RBMS1P29558 406 aaKnown RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 TSFMP43897 325 aaKnown RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 LRRC74AQ0VAA2 488 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 HEPACAMQ14CZ8 416 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 TMEM71Q6P5X7 295 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 WDR74Q6RFH5 385 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF621Q6ZSS3 439 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 RAB11FIP2Q7L804 512 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SPPL2CQ8IUH8 684 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SLITRK4Q8IW52 837 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SRFBP1Q8NEF9 429 aaKnown RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 VPS37AQ8NEZ2 397 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 OR4A15Q8NGL6 344 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 UTP15Q8TED0 518 aaKnown RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SLCO4A1Q96BD0 722 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 DUS3LQ96G46 650 aaKnown RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 ZNF764Q96H86 408 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-201ENST00000258962 LRGUKQ96M69 825 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 TRAPPC9Q96Q05 1148 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 CMKLR1Q99788 373 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 SATB2Q9UPW6 733 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 ASB4Q9Y574 426 aa16.51■□□□□ 0.23
SRSF1-201ENST00000258962 IGHV5-10-1A0A0J9YXX1 117 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 AQP12BA6NM10 295 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 FAM220BPB1ANY3 271 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 H0YGG7 62 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 CLIC1O00299 241 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 NVLO15381 856 aaKnown RBP16.5■□□□□ 0.23
SRSF1-201ENST00000258962 SMIM10L1P0DMW3 83 aa16.5■□□□□ 0.23
SRSF1-201ENST00000258962 ALDH9A1P49189 494 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms