RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CPNE3O75131 537 aaKnown RBP18.06■□□□□ 0.48
SNX4-201ENST00000251775 ETHE1O95571 254 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 PCSK2P16519 638 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 CRYBB2P43320 205 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 BDKRB1P46663 353 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 KCNC3Q14003 757 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 EFR3AQ14156 821 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 RGNQ15493 299 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 NAGSQ8N159 534 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 BTN2A2Q8WVV5 523 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 MED8Q96G25 268 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 LSM2Q9Y333 95 aaKnown RBP18.06■□□□□ 0.48
SNX4-201ENST00000251775 CMAHPQ9Y471 501 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 WNT6Q9Y6F9 365 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 PCDH7O60245 1069 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 SH3BGRLO75368 114 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 PTX3P26022 381 aaPredicted RBP18.06■□□□□ 0.48
SNX4-201ENST00000251775 CDC42P60953 191 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 GAB1Q13480 694 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 TRIM48Q8IWZ4 208 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 TP53I13Q8NBR0 393 aaPredicted RBP18.06■□□□□ 0.48
SNX4-201ENST00000251775 ZFAND1Q8TCF1 268 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 GTPBP3Q969Y2 492 aaKnown RBP18.06■□□□□ 0.48
SNX4-201ENST00000251775 PRRG3Q9BZD7 231 aa18.06■□□□□ 0.48
SNX4-201ENST00000251775 TSPAN11A1L157 253 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 OR6C70A6NIJ9 312 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 J3KTA2 159 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ZNF780AO75290 641 aaPredicted RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 CSF3P09919 207 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ENDOUP21128 410 aaKnown RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 WEE1P30291 646 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 PCDH1Q08174 1060 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ARMCX6Q7L4S7 300 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 TECPR1Q7Z6L1 1165 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 KIAA0907Q7Z7F0 614 aaPredicted RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 NLRP8Q86W28 1048 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ZNF366Q8N895 744 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 UBASH3BQ8TF42 649 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 TRIM43Q96BQ3 446 aaPredicted RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 REPS1Q96D71 796 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 C11orf24Q96F05 449 aaPredicted RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 FRMD6Q96NE9 622 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CITED4Q96RK1 184 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 TCF25Q9BQ70 676 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ZSCAN5AQ9BUG6 496 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 AP1M2Q9Y6Q5 423 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 LOC105371267A0A1B0GV96 52 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 IQCMA0A1B0GVH7 501 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 A8MVJ9 347 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ZNF670-ZNF695F2Z2N8 137 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 PCDH17O14917 1159 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CSF2P04141 144 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CYP17A1P05093 508 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CKMT1AP12532 417 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 EPHA5P54756 1037 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 HOXC5Q00444 222 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 RHAGQ02094 409 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 SYTL3Q4VX76 610 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 SLC35F1Q5T1Q4 408 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 FAM131AQ6UXB0 335 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 PTCHD4Q6ZW05 846 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ELMOD2Q8IZ81 293 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 C11orf65Q8NCR3 313 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CLP1Q92989 425 aaKnown RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 TMEM159Q96B96 161 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 TIFAQ96CG3 184 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 FAM129BQ96TA1 746 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 DUSP26Q9BV47 211 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 MIXL1Q9H2W2 232 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 RNF121Q9H920 327 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 ZNF556Q9HAH1 456 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CLN6Q9NWW5 311 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 FTSJ1Q9UET6 329 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 CLEC2DQ9UHP7 191 aa18.05■□□□□ 0.48
SNX4-201ENST00000251775 RUVBL1Q9Y265 456 aaKnown RBP18.05■□□□□ 0.48
SNX4-201ENST00000251775 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 PCM1Q15154 2024 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 NPC1O15118 1278 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 FHP07954 510 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SYN1P17600 705 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 KIR2DL3P43628 341 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 RAE1P78406 368 aaKnown RBP18.04■□□□□ 0.48
SNX4-201ENST00000251775 ACSM2AQ08AH3 577 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 FAPQ12884 760 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 LARS2Q15031 903 aaKnown RBP18.04■□□□□ 0.48
SNX4-201ENST00000251775 ZNF77Q15935 545 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 IFI44LQ53G44 452 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ACSM2BQ68CK6 577 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 GRHL2Q6ISB3 625 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 GDPGP1Q6ZNW5 385 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 LIX1LQ8IVB5 337 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 GLYATL1Q969I3 302 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 PKP4Q99569 1192 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 FAM83CQ9BQN1 747 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 CRISPLD2Q9H0B8 497 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 SGK2Q9HBY8 427 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 ABCB9Q9NP78 766 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 TOR4AQ9NXH8 423 aa18.04■□□□□ 0.48
SNX4-201ENST00000251775 NFKBIL1Q9UBC1 381 aaPredicted RBP18.04■□□□□ 0.48
SNX4-201ENST00000251775 SLC5A10A0PJK1 596 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms