RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 DEPDC4Q8N2C3 294 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 MACROD1Q9BQ69 325 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 LGR4Q9BXB1 951 aa24.32■■□□□ 1.48
RAB40C-201ENST00000248139 AGAP5A6NIR3 686 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 KDM1AO60341 852 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 SERPIND1P05546 499 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 MAPK12P53778 367 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 ARHGEF6Q15052 776 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 C9orf64Q5T6V5 341 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 FRMPD2BQ6IN97 320 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 DEF8Q6ZN54 512 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 HEATR4Q86WZ0 1026 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 POC5Q8NA72 575 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 DENND6BQ8NEG7 585 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 DNAJC27Q9NZQ0 273 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 PAIP2BQ9ULR5 123 aaKnown RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 KRT75O95678 551 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 PTX3P26022 381 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 PXNP49023 591 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 LACC1Q8IV20 430 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 REM2Q8IYK8 340 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 WDR36Q8NI36 951 aaKnown RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 KCNS3Q9BQ31 491 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 ZNF717Q9BY31 904 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-201ENST00000248139 FTSJ1Q9UET6 329 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 CLEC2DQ9UHP7 191 aa24.31■■□□□ 1.48
RAB40C-201ENST00000248139 C5orf58C9J3I9 102 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 LATO43561 262 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 ENTPD6O75354 484 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 UPK1BO75841 260 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 ADRB3P13945 408 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 CRISP1P54107 249 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 DEPDC1Q5TB30 811 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 MLIPQ5VWP3 458 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 REEP3Q6NUK4 255 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 USP43Q70EL4 1123 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 FAM129CQ86XR2 697 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 C12orf76Q8N812 135 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 FBXO15Q8NCQ5 510 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 TFGQ92734 400 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 PAWRQ96IZ0 340 aaKnown RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 OR52A5Q9H2C5 316 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 MMP27Q9H306 513 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 CTPS2Q9NRF8 586 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 A8MU76 341 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 PI15O43692 258 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 PRKRAO75569 313 aaKnown RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 TIMP1P01033 207 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 CDC42P60953 191 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 MEX3DQ86XN8 651 aaKnown RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 KIAA1958Q8N8K9 716 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 OR5D16Q8NGK9 328 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 TM4SF18Q96CE8 201 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 ZCCHC2Q9C0B9 1178 aaKnown RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 KLHL25Q9H0H3 589 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 TEX10Q9NXF1 929 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-201ENST00000248139 MARK1Q9P0L2 795 aa24.3■■□□□ 1.48
RAB40C-201ENST00000248139 ALPPL2P10696 532 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 RHCEP18577 417 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 UQCRC2P22695 453 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 CTNNB1P35222 781 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 SPDYE7PQ495Y7 208 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 LINC00299Q6ZSB3 139 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 UTS2BQ765I0 119 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 COMTD1Q86VU5 262 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 PARP16Q8N5Y8 322 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 LRIG1Q96JA1 1093 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 MGLLQ99685 303 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 PCDHGA3Q9Y5H0 932 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 KIAA0513O60268 411 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 ALOX12P18054 663 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 UGT2B10P36537 528 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 PRMT2P55345 433 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 OR2L2Q8NH16 312 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 EPHX3Q9H6B9 360 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 KIAA1549LQ6ZVL6 1849 aa24.29■■□□□ 1.48
RAB40C-201ENST00000248139 GLOD5A6NK44 160 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 ZAR1LA6NP61 321 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 CNOT3O75175 753 aaKnown RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 PRNPP04156 253 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 DDX6P26196 483 aaKnown RBP eCLIP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 SOX3P41225 446 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 PIK3CBP42338 1070 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 HMGA2P52926 109 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 TUBA1BP68363 451 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 AGAP7PQ5VUJ5 663 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 ZNF770Q6IQ21 691 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 TCTN3Q6NUS6 607 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 TUBA1AQ71U36 451 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 MRPS23Q9Y3D9 190 aaKnown RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 H3BN98 237 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 TMPRSS11DO60235 418 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 OR10H3O60404 316 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 DLGAP3O95886 979 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 IFNA14P01570 189 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 PCCBP05166 539 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 C6orf120Q7Z4R8 191 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 IQCF1Q8N6M8 205 aa24.28■■□□□ 1.48
RAB40C-201ENST00000248139 ZNF557Q8N988 423 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-201ENST00000248139 GIN1Q9NXP7 522 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms