RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 H3BSA7 217 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 PGRMC2O15173 223 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 ITGAMP11215 1152 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 ETS2P15036 469 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 DGKEP52429 567 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 KIR2DS3Q14952 304 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 IFI44LQ53G44 452 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 TNFAIP8L2Q6P589 184 aaPredicted RBP17.52■□□□□ 0.4
HOXC11-201ENST00000243082 VN1R4Q7Z5H5 301 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 GALNT5Q7Z7M9 940 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 SLC30A8Q8IWU4 369 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 PIK3C3Q8NEB9 887 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 GPBAR1Q8TDU6 330 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 AMDHD1Q96NU7 426 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 OR2A14Q96R47 310 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 EPYCQ99645 322 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 ING2Q9H160 280 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 TCEAL2Q9H3H9 227 aaPredicted RBP17.52■□□□□ 0.4
HOXC11-201ENST00000243082 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 DMTF1Q9Y222 760 aa17.52■□□□□ 0.4
HOXC11-201ENST00000243082 GLOD5A6NK44 160 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 TNFP01375 233 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 C9P02748 559 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 CHRNB1P11230 501 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 SRFP11831 508 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 CERS1P27544 350 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 PEX19P40855 299 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 OR1E2P47887 323 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 CCT3P49368 545 aaKnown RBP17.52■□□□□ 0.39
HOXC11-201ENST00000243082 HLCSP50747 726 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 RAB8AP61006 207 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 ILF3Q12906 894 aaKnown RBP eCLIP17.52■□□□□ 0.39
HOXC11-201ENST00000243082 GPR18Q14330 331 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 REEP3Q6NUK4 255 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 FBXO42Q6P3S6 717 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 TRIM73Q86UV7 250 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 SRFBP1Q8NEF9 429 aaKnown RBP17.52■□□□□ 0.39
HOXC11-201ENST00000243082 LZICQ8WZA0 190 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 A4GALTQ9NPC4 353 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.39
HOXC11-201ENST00000243082 FANCMQ8IYD8 2048 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 OR2A25A4D2G3 310 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 ZW10O43264 779 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 B4GAT1O43505 415 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 RRM2P31350 389 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 TSFMP43897 325 aaKnown RBP17.51■□□□□ 0.39
HOXC11-201ENST00000243082 RXRGP48443 463 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 ISL1P61371 349 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 RPS15AP62244 130 aaKnown RBP17.51■□□□□ 0.39
HOXC11-201ENST00000243082 SPDYE7PQ495Y7 208 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF691Q5VV52 312 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 SLC38A5Q8WUX1 472 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 PATE1Q8WXA2 126 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 RUBCNLQ9H714 662 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 WSB2Q9NYS7 404 aaPredicted RBP17.51■□□□□ 0.39
HOXC11-201ENST00000243082 FBXW2Q9UKT8 454 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 PCDHGB3Q9Y5G1 929 aa17.51■□□□□ 0.39
HOXC11-201ENST00000243082 ARHGEF17Q96PE2 2063 aaPredicted RBP17.51■□□□□ 0.39
HOXC11-201ENST00000243082 TNFSF14O43557 240 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 PRAMEF10O60809 474 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 JRKO75564 520 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 IFNA14P01570 189 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 FESP07332 822 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 TFPTP0C1Z6 253 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 UGT2B7P16662 529 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 STXBP1P61764 594 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CD47Q08722 323 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 EIF2B5Q13144 721 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 MAPK11Q15759 364 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 MEP1AQ16819 746 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CTU2Q2VPK5 515 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CYP27C1Q4G0S4 372 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 LAIR2Q6ISS4 152 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 FAHD1Q6P587 224 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 SMYD1Q8NB12 490 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 KCT2Q8NC54 265 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CHDHQ8NE62 594 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 NMD3Q96D46 503 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 SERHL2Q9H4I8 314 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 UBE2ZQ9H832 354 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 THSD1Q9NS62 852 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CES1P1Q9UKY3 287 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 COMMD3-BMI1R4GMX3 469 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CCDC160A6NGH7 325 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 HMGN4O00479 90 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 GUCY1B2O75343 617 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 AIFM1O95831 613 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 IL7RP16871 459 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 CDH2P19022 906 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 POLR2CP19387 275 aaPredicted RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 MAGP20916 626 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 SNRPNP63162 240 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 RBM48Q5RL73 367 aaKnown RBP17.5■□□□□ 0.39
HOXC11-201ENST00000243082 C6orf141Q5SZD1 244 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 C18orf63Q68DL7 685 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 SYT13Q7L8C5 426 aa17.5■□□□□ 0.39
HOXC11-201ENST00000243082 ARMC8Q8IUR7 673 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms