RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ARF5P84085 180 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 GAB1Q13480 694 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 ASAH1Q13510 395 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 LRRC32Q14392 662 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 DOHHQ9BU89 302 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 RBCK1Q9BYM8 510 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 PCDHB16Q9NRJ7 776 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 NDRG2Q9UN36 371 aaKnown RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 POM121CA8CG34 1229 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 PLA2G10O15496 165 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 PRAMEF4O60810 478 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 ENTPD6O75354 484 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 CCNB2O95067 398 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 ALDH1A1P00352 501 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 AMD1P17707 334 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 CR2P20023 1033 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 MAPK1P28482 360 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 ATP5C1P36542 298 aaKnown RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 EXOSC2Q13868 293 aaKnown RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 CPTPQ5TA50 214 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 PRAMEF9Q5VWM5 478 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 GLB1LQ6UWU2 654 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 WBP2Q969T9 261 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 FOPNLQ96NB1 174 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 PITX2Q99697 317 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 BEX1Q9HBH7 125 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 UBQLN2Q9UHD9 624 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 YARS2Q9Y2Z4 477 aaKnown RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 LINC00862A6NCI5 91 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 LGALS8O00214 317 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 KLKB1P03952 638 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 HOXD4P09016 255 aaPredicted RBP13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 ETV6P41212 452 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 VRK3Q8IV63 474 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 C9orf62Q8N4C0 152 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 SERHL2Q9H4I8 314 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 SSR3Q9UNL2 185 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 TRAPPC4Q9Y296 219 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
PCDHB3-201ENST00000231130 A0A0U1RQF3 1178 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 ADAMDEC1O15204 470 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 PRPS1L1P21108 318 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 HMGCLP35914 325 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 CSNK2BP67870 215 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 ABRQ12979 859 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 TTLL9Q3SXZ7 439 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 BCL2L15Q5TBC7 163 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 DDI2Q5TDH0 399 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 RNF130Q86XS8 419 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 LINC00052Q96N35 136 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 C12orf57Q99622 126 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 LINC00597Q9H2U6 94 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 C3orf14Q9HBI5 128 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 CTPS2Q9NRF8 586 aa13.52□□□□□ -0.24
PCDHB3-201ENST00000231130 PIPSLA2A3N6 862 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 GABRR3A8MPY1 467 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 BPIP17213 487 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 GPX2P18283 190 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 PSPHP78330 225 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 MEX3DQ86XN8 651 aaKnown RBP13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 MYO19Q96H55 970 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 PCDHGA2Q9Y5H1 932 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 LINC01387J3KSC0 135 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 LYRM1O43325 122 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 GADD45GO95257 159 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ACADMP11310 421 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 TYMPP19971 482 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 CDH4P55283 916 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 MC1RQ01726 317 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 RGNQ15493 299 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 TUSC1Q2TAM9 212 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 OR6M1Q8NGM8 313 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms