RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 NKD1Q969G9 470 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ENAMQ9NRM1 1142 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ABCD2Q9UBJ2 740 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 CBLP22681 906 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ADARB1P78563 741 aaKnown RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 RGS1Q08116 209 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 SLC30A6Q6NXT4 461 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 DLEU7Q6UYE1 221 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 NMNAT1Q9HAN9 279 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 TTC34A8MYJ7 566 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 DLGAP1O14490 977 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ENTPD6O75354 484 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 OR2B3O76000 313 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PTHP01270 115 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ALPPP05187 535 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 CBSLP0DN79 551 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 CD9P21926 228 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 CBSP35520 551 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 LIPAP38571 399 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 YBX1P67809 324 aaKnown RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNHIT3Q15649 155 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF181Q2M3W8 571 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 SBSNQ6UWP8 590 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PEX5LQ8IYB4 626 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 NEIL2Q969S2 332 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF486Q96H40 463 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZSCAN5AQ9BUG6 496 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 GPN2Q9H9Y4 310 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 BRD7Q9NPI1 651 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 LEFTY2O00292 366 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 AREL1O15033 823 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 AKAP8O43823 692 aaKnown RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 AMD1P17707 334 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 IDSP22304 550 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 KELP23276 732 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PDHA2P29803 388 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 HTR2BP41595 481 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 STAT5AP42229 794 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF81P51508 661 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 SEC13P55735 322 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 FAM92BQ6ZTR7 304 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 WDR53Q7Z5U6 358 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 KLBQ86Z14 1044 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 OR4N5Q8IXE1 308 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 POMGNT2Q8NAT1 580 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 OR51L1Q8NGJ5 315 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 C1orf216Q8TAB5 229 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
NFKB1-201ENST00000226574 OR5M11Q96RB7 305 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 OR51I1Q9H343 314 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
NFKB1-201ENST00000226574 KNTC1P50748 2209 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 GTPBP1O00178 669 aaKnown RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TNFSF8P32971 234 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 SPINT3P49223 89 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 RGS6P49758 472 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ELMOD2Q8IZ81 293 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 OR8K3Q8NH51 312 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 GGHQ92820 318 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 GLYATL1Q969I3 302 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 RERGQ96A58 199 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TM9SF2Q99805 663 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 KCNN2Q9H2S1 579 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 ELOVL2Q9NXB9 296 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 KDM4BO94953 1096 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 HLA-DPB1P04440 258 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 MMP2P08253 660 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CTSEP14091 401 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 CSNK2A2P19784 350 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-201ENST00000226574 DRD5P21918 477 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 GPR4P46093 362 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 STARP49675 285 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 SELENOWP63302 87 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 HBA1P69905 142 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 MAB21L1Q13394 359 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 TEAD2Q15562 447 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
NFKB1-201ENST00000226574 GET4Q7L5D6 327 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms