RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 PRR35P0CG20 571 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 PRKAR1AP10644 381 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 BUD31P41223 144 aaPredicted RBP14.1□□□□□ -0.15
RPA3-201ENST00000223129 AQP5P55064 265 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 ID2Q02363 134 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 SF3A3Q12874 501 aaKnown RBP eCLIP14.1□□□□□ -0.15
RPA3-201ENST00000223129 SLC13A2Q13183 592 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 IL23RQ5VWK5 629 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 EPGNQ6UW88 154 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 CCDC81Q6ZN84 652 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 LANCL3Q6ZV70 420 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 LRRC34Q8IZ02 419 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 ADAMTS18Q8TE60 1221 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 C8orf44Q96CB5 159 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 OR52B2Q96RD2 323 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 C5AR2Q9P296 337 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 HEY2Q9UBP5 337 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 MRPS33Q9Y291 106 aaKnown RBP14.1□□□□□ -0.15
RPA3-201ENST00000223129 TGFBR3LH3BV60 316 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 CLDN4O14493 209 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 ALOX12BO75342 701 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 NR2F6P10588 404 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 BCKDHAP12694 445 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 SDC1P18827 310 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 TLX1P31314 330 aaPredicted RBP14.1□□□□□ -0.15
RPA3-201ENST00000223129 ZNF763Q0D2J5 394 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 NSDHLQ15738 373 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 BROXQ5VW32 411 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 NXNQ6DKJ4 435 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 MED25Q71SY5 747 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 ZNF595Q8IYB9 648 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 AMER2Q8N7J2 671 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 PLPP5Q8NEB5 264 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 CLHC1Q8NHS4 586 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 GFM2Q969S9 779 aaKnown RBP14.1□□□□□ -0.15
RPA3-201ENST00000223129 TSSK3Q96PN8 268 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 EBF4Q9BQW3 602 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 NPHS2Q9NP85 383 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 SEMA3GQ9NS98 782 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 TMED5Q9Y3A6 229 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 HS3ST3B1Q9Y662 390 aa14.1□□□□□ -0.15
RPA3-201ENST00000223129 CDC14CA4D256 554 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 LBPP18428 481 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 MMP11P24347 488 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 ALDH9A1P49189 494 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 IDH3AP50213 366 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 TRA2BP62995 288 aaKnown RBP14.09□□□□□ -0.15
RPA3-201ENST00000223129 EMX2Q04743 252 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 C2orf80Q0P641 193 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 FAM180BQ6P0A1 224 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 PPP1R32Q7Z5V6 425 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 LIX1Q8N485 282 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.09□□□□□ -0.155e-8■□□□□ 10.3
RPA3-201ENST00000223129 ADAMTS17Q8TE56 1095 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 MAELQ96JY0 434 aaKnown RBP14.09□□□□□ -0.15
RPA3-201ENST00000223129 ZNF317Q96PQ6 595 aaPredicted RBP14.09□□□□□ -0.15
RPA3-201ENST00000223129 PRDM9Q9NQV7 894 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 DCTN4Q9UJW0 460 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 PCDHA9Q9Y5H5 950 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 CLDN16Q9Y5I7 305 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 PCSK5Q92824 1860 aa14.09□□□□□ -0.15
RPA3-201ENST00000223129 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.15
RPA3-201ENST00000223129 IGHV3-20A0A0C4DH32 117 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 FGF17O60258 216 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 CTNSO60931 367 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 GUCY1B2O75343 617 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 VPS4BO75351 444 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 LRATO95237 230 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 C8orf89P0DMQ9 161 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.15
RPA3-201ENST00000223129 DIO3P55073 304 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 HSD17B7P56937 341 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 UGT8Q16880 541 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 CGB2Q6NT52 195 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 SCUBE1Q8IWY4 988 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 TMEM132CQ8N3T6 1108 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 DNAJB14Q8TBM8 379 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 METTL21AQ8WXB1 218 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 ANKRD9Q96BM1 317 aaPredicted RBP14.08□□□□□ -0.15
RPA3-201ENST00000223129 WDR41Q9HAD4 459 aa14.08□□□□□ -0.15
RPA3-201ENST00000223129 EXO1Q9UQ84 846 aaKnown RBP14.08□□□□□ -0.15
RPA3-201ENST00000223129 A0A1W2PS29 197 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 C1orf226A1L170 272 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 SRRM3A6NNA2 597 aaPredicted RBP14.08□□□□□ -0.16
RPA3-201ENST00000223129 ZNF891A8MT65 544 aaPredicted RBP14.08□□□□□ -0.16
RPA3-201ENST00000223129 MASP2O00187 686 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 SOCS6O14544 535 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 TGDSO95455 350 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 ALDOCP09972 364 aaKnown RBP14.08□□□□□ -0.16
RPA3-201ENST00000223129 G6PDP11413 515 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 ERVK-8P63133 956 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 FOLH1Q04609 750 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 PTGR1Q14914 329 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 LSM12Q3MHD2 195 aaKnown RBP14.08□□□□□ -0.16
RPA3-201ENST00000223129 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 TMEM205Q6UW68 189 aa14.08□□□□□ -0.16
RPA3-201ENST00000223129 KIRREL2Q6UWL6 708 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms