RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm10340K7N708 205 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3696K7N751 203 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm8281L7N235 204 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nme6O88425 189 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 P01641 117 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kcnc1P15388 511 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Abcb1aP21447 1276 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Apex1P28352 317 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tas2r7P59530 312 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nos3P70313 1202 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Serpine2Q07235 397 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ing4Q8C0D7 249 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sidt2Q8CIF6 832 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 ManbaQ8K2I4 879 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Lipt1Q8VCM4 373 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr692Q8VF03 329 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr986Q8VFN6 312 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pcyt2Q922E4 404 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gpr146Q99LE2 333 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr891E9Q843 316 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm20671F6TVX7 576 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 FpgtG5E8F4 590 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Scarb2O35114 478 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Itgb1P09055 798 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Dpf3P58269 378 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp658Q5PPQ4 887 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Lrrn1Q61809 716 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc39a10Q6P5F6 833 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm5346Q7M766 736 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slitrk4Q810B8 837 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Acot4Q8BWN8 421 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Dhcr24Q8VCH6 516 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr818Q8VG46 318 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 AmnQ99JB7 458 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gid4Q9CPY6 217 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pinx1Q9CZX5 332 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 B4galt6Q9WVK5 382 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Alox8O35936 677 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Aup1P70295 410 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 CblbQ3TTA7 982 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm14226Q3TZL0 686 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1231Q7TQZ8 313 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Galnt7Q80VA0 657 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Coro2bQ8BH44 480 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pramef8Q8CE24 480 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem17Q8K0U3 198 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 St3gal4Q91Y74 333 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 MrgpreQ91ZB7 310 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Psmd8Q9CX56 353 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Dusp6Q9DBB1 381 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nectin3Q9JLB9 549 aa9.9□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ttll2A4Q9E4 540 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Arl9F7BE40 171 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Adam3F8VQ03 822 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mup3P04939 184 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ugt2b17P17717 530 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Htr7P32304 448 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ikzf2P81183 526 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc15a3Q8BPX9 578 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cfap20Q8BTU1 193 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pithd1Q8BWR2 211 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Larp4Q8BWW4 719 aaKnown RBP9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gpr158Q8C419 1200 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 EfhbQ8CDU5 853 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slco3a1Q8R3L5 710 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Chchd4Q8VEA4 139 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Spns2Q91VM4 549 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Grip1Q925T6 1127 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cyp4f15Q99N18 534 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Itgb3bpQ9CQ82 176 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nmrk2Q9D7C9 195 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tvp23bQ9D8T4 205 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TsaccQ9DA44 124 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Copz2Q9JHH9 205 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 CtsrQ9JIA9 334 aa9.9□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr239A0PK55 315 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Zfp981A2A8V7 445 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Aldoart2A6ZI47 364 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm12800B1AUV4 484 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr55K7N6Q1 315 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8229K7N749 213 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 ChadO55226 358 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Zfp37P17141 594 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Crhr1P35347 415 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rpl6P47911 296 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rpl10lP86048 214 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Arhgap9Q1HDU4 648 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fam105aQ3TVP5 353 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tfap2cQ61312 449 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cnih3Q6ZWS4 160 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rpl10Q6ZWV3 214 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tas2r140Q7TQA4 312 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gpr171Q8BG55 319 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Frs2Q8C180 508 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr441Q8VFS5 310 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr691Q8VGW5 322 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sohlh2Q9D489 467 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Trhr2Q9ERT2 382 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TescQ9JKL5 214 aa9.89□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Obox6G3X9U1 347 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms