RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SDK2Q58EX2 2172 aa8.9□□□□□ -0.98
PHGDH-228ENST00000641847 CSMD2Q7Z408 3487 aa8.9□□□□□ -0.99
PHGDH-228ENST00000641847 A0A0G2JN53 185 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 WIPF3A6NGB9 483 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 URADA6NGE7 173 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 RTCAO00442 366 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 TXNDC9O14530 226 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ZSCAN9O15535 394 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ERI3O43414 337 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 PCDH7O60245 1069 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SEC22BO75396 215 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 OR2B3O76000 313 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 STK17BO94768 372 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 MYO1DO94832 1006 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 LDLRP01130 860 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ALDOCP09972 364 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 MAPK1P28482 360 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 GRNP28799 593 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 TIA1P31483 386 aaKnown RBP eCLIP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SSR2P43308 183 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ITGA1P56199 1179 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 RAB8AP61006 207 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ERVK-8P63133 956 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 EMX2Q04743 252 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 TGM3Q08188 693 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 MAD2L1Q13257 205 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ERV3-1Q14264 604 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 GRM7Q14831 915 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 KIAA0040Q15053 153 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 INPP5JQ15735 1006 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SMU1Q2TAY7 513 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 PRTGQ2VWP7 1150 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 RFTN2Q52LD8 501 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 C6orf136Q5SQH8 315 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 OGFOD2Q6N063 350 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 TMEM214Q6NUQ4 689 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ABHD13Q7L211 337 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 COMMD6Q7Z4G1 85 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SPATA19Q7Z5L4 167 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 UBE3DQ7Z6J8 389 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 KCT2Q8NC54 265 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 OR2L5Q8NG80 312 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 UTP15Q8TED0 518 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 CHTF18Q8WVB6 975 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 RGMAQ96B86 450 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ZNF501Q96CX3 271 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 METTL2AQ96IZ6 378 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 FCRL1Q96LA6 429 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 C10orf90Q96M02 699 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 OR6C1Q96RD1 312 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ZNF717Q9BY31 904 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SPRTNQ9H040 489 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 COPS7BQ9H9Q2 264 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 LHX9Q9NQ69 397 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 FGF21Q9NSA1 209 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 OCIAD1Q9NX40 245 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ASIC5Q9NY37 505 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 AHSPQ9NZD4 102 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 NOP53Q9NZM5 478 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 HEY2Q9UBP5 337 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 EIF3LQ9Y262 564 aaKnown RBP8.89□□□□□ -0.99
PHGDH-228ENST00000641847 TMED5Q9Y3A6 229 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 HIVEP1P15822 2718 aa8.89□□□□□ -0.99
PHGDH-228ENST00000641847 ARHGAP10A1A4S6 786 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 HYKKA2RU49 373 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 FITM1A5D6W6 292 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 H3BMH7 237 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 K7EM74 188 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 FCHO1O14526 889 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 POLR1CO15160 346 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-228ENST00000641847 UBDO15205 165 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 DCTN3O75935 186 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 SCELO95171 688 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 B3GALT4O96024 378 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 KLK1P06870 262 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 ACPPP15309 386 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 IL1RNP18510 177 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 SDC1P18827 310 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 NCF2P19878 526 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-228ENST00000641847 CERS1P27544 350 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 BSGP35613 385 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 DLSTP36957 453 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 STAT5AP42229 794 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 PLA2G16P53816 162 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 DIO3P55073 304 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 SNRPNP63162 240 aaKnown RBP8.88□□□□□ -0.99
PHGDH-228ENST00000641847 RAE1P78406 368 aaKnown RBP8.88□□□□□ -0.99
PHGDH-228ENST00000641847 MC2RQ01718 297 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 FOXM1Q08050 763 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
PHGDH-228ENST00000641847 MAP7Q14244 749 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 SQLEQ14534 574 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 NDUFA9Q16795 377 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 ATP1A1-AS1Q5TC04 95 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 GARNL3Q5VVW2 1013 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 IL23RQ5VWK5 629 aa8.88□□□□□ -0.99
PHGDH-228ENST00000641847 METTL21CQ5VZV1 264 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms