RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PIP5K1AQ99755 562 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 CDADC1Q9BWV3 514 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 TMEM165Q9HC07 324 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 SCHIP1Q9P0W5 487 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 ANKDD1BA6NHY2 528 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 AGRPO00253 132 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SCAMP1O15126 338 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 NME6O75414 186 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 CHMP24386 653 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 ACADLP28330 430 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 MED22Q15528 200 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PLEKHG7Q6ZR37 379 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SZRD1Q7Z422 152 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 KLHDC8AQ8IYD2 350 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 OR4D11Q8NGI4 311 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 HPS1Q92902 700 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 EFCAB11Q9BUY7 163 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF717Q9BY31 904 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 NMNAT1Q9HAN9 279 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 MYNNQ9NPC7 610 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 MAFFQ9ULX9 164 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 FOXE1O00358 373 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PAPLNO95428 1278 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SPNP16150 400 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 EIF2DP41214 584 aaKnown RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PCBP3P57721 371 aaKnown RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PCDH1Q08174 1060 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 FCHO2Q0JRZ9 810 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 DMC1Q14565 340 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 TBCEQ15813 527 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF404Q494X3 552 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PRAMEF14Q5SWL7 426 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PRAMEF13Q5VWM6 474 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 TRIM40Q6P9F5 258 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SLC46A3Q7Z3Q1 461 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 LACC1Q8IV20 430 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 MMAAQ8IVH4 418 aaKnown RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 GPR32P1Q8NGA4 272 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 POF1BQ8WVV4 589 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 S100ZQ8WXG8 99 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 EXOSC8Q96B26 276 aaKnown RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 PAWRQ96IZ0 340 aaKnown RBP16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SPATA9Q9BWV2 254 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 FKBP14Q9NWM8 211 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 POFUT2Q9Y2G5 429 aa16.03■□□□□ 0.16
PHGDH-223ENST00000641597 METTL15A6NJ78 407 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 H7BY64 318 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 QSOX1O00391 747 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 ALPPL2P10696 532 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 CKMT1AP12532 417 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 LIMS1P48059 325 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 EPHA5P54756 1037 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 DSTNP60981 165 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 FADDQ13158 208 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 FNDC3BQ53EP0 1204 aaKnown RBP16.02■□□□□ 0.16
PHGDH-223ENST00000641597 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 C10orf62Q5T681 223 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-223ENST00000641597 C9orf64Q5T6V5 341 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 RBM12BQ8IXT5 1001 aaKnown RBP16.02■□□□□ 0.16
PHGDH-223ENST00000641597 OXR1Q8N573 874 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 ITFG2Q969R8 447 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 REPS1Q96D71 796 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 PRAP1Q96NZ9 151 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 CTPS2Q9NRF8 586 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 NFKBIL1Q9UBC1 381 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-223ENST00000641597 DKK3Q9UBP4 350 aa16.02■□□□□ 0.16
PHGDH-223ENST00000641597 GLOD5A6NK44 160 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 DPM1O60762 260 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 ARAFP10398 606 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 ADH5P11766 374 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 ANXA8P13928 327 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 CBLP22681 906 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 RGS6P49758 472 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 STEAP3Q658P3 488 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 OR5D16Q8NGK9 328 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 MYDGFQ969H8 173 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 METTL2AQ96IZ6 378 aaKnown RBP16.02■□□□□ 0.15
PHGDH-223ENST00000641597 TMEM38AQ9H6F2 299 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 TEX10Q9NXF1 929 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-223ENST00000641597 DNAJC27Q9NZQ0 273 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 CLEC2DQ9UHP7 191 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 ZNF229Q9UJW7 825 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 MYO10Q9HD67 2058 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 TRPM6Q9BX84 2022 aa16.02■□□□□ 0.15
PHGDH-223ENST00000641597 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 SSX4O60224 188 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 TGM4P49221 684 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 CRB2Q5IJ48 1285 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 HIST2H2AA3Q6FI13 130 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 CYP4Z2PQ8N1L4 340 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 GEMIN6Q8WXD5 167 aaKnown RBP16.01■□□□□ 0.15
PHGDH-223ENST00000641597 WDR34Q96EX3 536 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 TMEM19Q96HH6 336 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 THSD1Q9NS62 852 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 IFT52Q9Y366 437 aa16.01■□□□□ 0.15
PHGDH-223ENST00000641597 HCN4Q9Y3Q4 1203 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms