RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MPP2Q14168 576 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 C18orf63Q68DL7 685 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 PLAG1Q6DJT9 500 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 CLNKQ7Z7G1 428 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 METTL4Q8N3J2 472 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 RBMXL3Q8N7X1 1067 aaKnown RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 NFAM1Q8NET5 270 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 BRIX1Q8TDN6 353 aaKnown RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 UCN3Q969E3 161 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 ANKRD9Q96BM1 317 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 PGM2Q96G03 612 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 IQCGQ9H095 443 aaKnown RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 BRF2Q9HAW0 419 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 SENP1Q9P0U3 644 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 C5AR2Q9P296 337 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 STK38LQ9Y2H1 464 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 A0A1W2PR48 441 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 SUV39H1O43463 412 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 PROM1O43490 865 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 CTNSO60931 367 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 ENO1P06733 434 aaKnown RBP25.01■■□□□ 1.59
VEGFA-231ENST00000640499 TPP2P29144 1249 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-231ENST00000640499 C19orf57Q0VDD7 668 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 IGFL2Q6UWQ7 119 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 GPR180Q86V85 440 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 CENPKQ9BS16 269 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 SHCBP1LQ9BZQ2 653 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 MID2Q9UJV3 735 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 SLC12A4Q9UP95 1085 aa25.01■■□□□ 1.59
VEGFA-231ENST00000640499 SPENQ96T58 3664 aaKnown RBP25■■□□□ 1.59
VEGFA-231ENST00000640499 ZNF462Q96JM2 2506 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 MYOCOSA0A1B0GUC4 107 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 KRT6AP02538 564 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 KRT6BP04259 564 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 CPN2P22792 545 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 ARRB2P32121 409 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 SOX11P35716 441 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 KRT6CP48668 564 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 SLC26A5P58743 744 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 ACTN3Q08043 901 aaPredicted RBP25■■□□□ 1.59
VEGFA-231ENST00000640499 NADK2Q4G0N4 442 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 CFAP157Q5JU67 520 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 SCIMPQ6UWF3 145 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 IGFL3Q6UXB1 125 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 RIPOR1Q6ZS17 1223 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 OR6Y1Q8NGX8 325 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 ACPTQ9BZG2 426 aa25■■□□□ 1.59
VEGFA-231ENST00000640499 SSU72Q9NP77 194 aaKnown RBP25■■□□□ 1.59
VEGFA-231ENST00000640499 A8MUA0 341 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 CLDN4O14493 209 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 ULK1O75385 1050 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 KLK1P06870 262 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 FAM58BPP0C7Q3 252 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 SERPINB3P29508 390 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 NAA20P61599 178 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 SLC13A2Q13183 592 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 AGAP7PQ5VUJ5 663 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 CES4AQ5XG92 561 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 B3GNTL1Q67FW5 361 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-231ENST00000640499 NUDT13Q86X67 352 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 M1APQ8TC57 530 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 AGAP4Q96P64 663 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 LPAR4Q99677 370 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 CENPHQ9H3R5 247 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 ADAM29Q9UKF5 820 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 CSAG2Q9Y5P2 127 aa24.99■■□□□ 1.59
VEGFA-231ENST00000640499 SERTM1A2A2V5 107 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 LDB3O75112 727 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 BPGMP07738 259 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 ICAM2P13598 275 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 HMOX2P30519 316 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 TNFRSF17Q02223 184 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 ID2Q02363 134 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 KLRB1Q12918 225 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 BTBD16Q32M84 506 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 COMMD6Q7Z4G1 85 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 SIRT6Q8N6T7 355 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 EFCAB3Q8N7B9 438 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 CHTF18Q8WVB6 975 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 CNDP1Q96KN2 507 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 NPAS2Q99743 824 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 MMP25Q9NPA2 562 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 PTGFRNQ9P2B2 879 aa24.98■■□□□ 1.59
VEGFA-231ENST00000640499 MRPS33Q9Y291 106 aaKnown RBP24.98■■□□□ 1.59
VEGFA-231ENST00000640499 SAGE2PA6NJ88 616 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 FGF17O60258 216 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 CHRNGP07510 517 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 HSD3B1P14060 373 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 HSD3B2P26439 372 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 IGLV3-21P80748 117 aaPredicted RBP24.97■■□□□ 1.59
VEGFA-231ENST00000640499 HMGCS1Q01581 520 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 CSTF3Q12996 717 aaKnown RBP24.97■■□□□ 1.59
VEGFA-231ENST00000640499 RCN2Q14257 317 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 H3F3CQ6NXT2 135 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 ZCCHC23Q6ZST2 131 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 OR4N5Q8IXE1 308 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 KIF2BQ8N4N8 673 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 ELP5Q8TE02 316 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 MFRPQ9BY79 579 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 TEX10Q9NXF1 929 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms