RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	GCNT6	Q5T4J0	391 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	RGMB	Q6NW40	437 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	TMEM179B	Q7Z7N9	219 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	C1orf216	Q8TAB5	229 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	MARC2	Q969Z3	335 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	L3HYPDH	Q96EM0	354 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	FCRL2	Q96LA5	508 aa	Predicted RBP	10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	DDO	Q99489	341 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	TMEM175	Q9BSA9	504 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	POT1	Q9NUX5	634 aa		10.91	□□□□□ -0.66
SPIN3-231	ENST00000639895	LOC285095	A0A1B0GVY8	99 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	CPSF4L	A6NMK7	179 aa	Known RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895		I6L893	689 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	DSCR3	O14972	297 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MAF	O75444	373 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	GPX5	O75715	221 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	EPO	P01588	193 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	HLA-DQB2	P05538	268 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	PRPS2	P11908	318 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	DGKA	P23743	735 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	OR1E1	P30953	314 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MC4R	P32245	332 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	OC90	Q02509	493 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MBTPS1	Q14703	1052 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	PAFAH1B3	Q15102	231 aa	Known RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	PRAMEF13	Q5VWM6	474 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	ZNF730	Q6ZMV8	503 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	GLRX5	Q86SX6	157 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	SLC29A3	Q9BZD2	475 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FLRT1	Q9NZU1	646 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FKBP7	Q9Y680	259 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	C2orf92	A0A1B0GVN3	265 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895		F5H0A9	414 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FAM72C	H0Y354	149 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MATN3	O15232	486 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	STK16	O75716	305 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	C1QA	P02745	245 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	ADRB1	P08588	477 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	JUND	P17535	347 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	PCSK1	P29120	753 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	PPM1F	P49593	454 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	INTS6L	Q5JSJ4	861 aa	Known RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FAM72A	Q5TYM5	149 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FAM72D	Q6L9T8	149 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	FAM72B	Q86X60	149 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	OR52P1P	Q8NH57	321 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	DNAJB8	Q8NHS0	232 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	ISL2	Q96A47	359 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	OR2M2	Q96R28	347 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	ASF1B	Q9NVP2	202 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	TCRBV5S1A1T	A0A578	114 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	CREBL2	O60519	120 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	HAPLN1	P10915	354 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	NAGA	P17050	411 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	IFNGR2	P38484	337 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	CEBPG	P53567	150 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895		Q5BKY6	102 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	CRB2	Q5IJ48	1285 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	HECTD3	Q5T447	861 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	SLC16A13	Q7RTY0	426 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	THEM5	Q8N1Q8	247 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	TMEM130	Q8N3G9	435 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	MS4A15	Q8N5U1	240 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	TMEM145	Q8NBT3	493 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	SLC25A51	Q9H1U9	297 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	OR51B5	Q9H339	312 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	GTF2A1L	Q9UNN4	478 aa		10.9	□□□□□ -0.66
SPIN3-231	ENST00000639895	LRRN3	E7EW58	273 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	LCMT2	O60294	686 aa	Known RBP	10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	CLDN9	O95484	217 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	CH25H	O95992	272 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	TPO	P07202	933 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ATXN8OS	P0DMR3	200 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ARL2	P36404	184 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	HAAO	P46952	286 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	FBXO16	Q8IX29	292 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	SVBP	Q8N300	66 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	TCEAL7	Q9BRU2	100 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	SPATA5L1	Q9BVQ7	753 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	NKX6-2	Q9C056	277 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ACTR6	Q9GZN1	396 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	LRRN3	Q9H3W5	708 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	NUDT4	Q9NZJ9	180 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	DIMT1	Q9UNQ2	313 aa	Known RBP	10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ERVK-19	Q9WJR5	959 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	TLR6	Q9Y2C9	796 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895		A0A0G2JMP0	313 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	FGF10	O15520	208 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ZNF254	O75437	659 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	RGS11	O94810	467 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	CBX7	O95931	251 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	IL1A	P01583	271 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	ITPKA	P23677	461 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	HOXD10	P28358	340 aa		10.89	□□□□□ -0.67
SPIN3-231	ENST00000639895	MMP12	P39900	470 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms