RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SNX6Q9UNH7 406 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 MMACHCQ9Y4U1 282 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 RGS16O15492 202 aaPredicted RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ESRRBO95718 433 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ALDH3A1P30838 453 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ID2Q02363 134 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ACTN3Q08043 901 aaPredicted RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 KLRB1Q12918 225 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 LIPMQ5VYY2 423 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 PLAG1Q6DJT9 500 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 MRM1Q6IN84 353 aaKnown RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 SCIMPQ6UWF3 145 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 LINC00696Q6ZRV3 163 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ZNF595Q8IYB9 648 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ZCCHC7Q8N3Z6 543 aaKnown RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 TEX19Q8NA77 164 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 SERPINI1Q99574 410 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 GATA5Q9BWX5 397 aaPredicted RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 IQCGQ9H095 443 aaKnown RBP20.41■□□□□ 0.86
SCN1B-206ENST00000638536 LUZP4Q9P127 313 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 SLC12A4Q9UP95 1085 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 ASB4Q9Y574 426 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 PCDHGB7Q9Y5F8 929 aa20.41■□□□□ 0.86
SCN1B-206ENST00000638536 CCDC151A5D8V7 595 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 PYCARD-AS1I3L0S3 204 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 CPN2P22792 545 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 SERPINB3P29508 390 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 TSFMP43897 325 aaKnown RBP20.4■□□□□ 0.86
SCN1B-206ENST00000638536 HSD17B7P56937 341 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 AGAP7PQ5VUJ5 663 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 PRICKLE2Q7Z3G6 844 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 OR4N5Q8IXE1 308 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 EFCAB3Q8N7B9 438 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 MAGEB10Q96LZ2 347 aaPredicted RBP20.4■□□□□ 0.86
SCN1B-206ENST00000638536 AGAP4Q96P64 663 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 LPAR4Q99677 370 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 CENPKQ9BS16 269 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 CENPHQ9H3R5 247 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 C5AR2Q9P296 337 aa20.4■□□□□ 0.86
SCN1B-206ENST00000638536 G3BP2Q9UN86 482 aaKnown RBP20.4■□□□□ 0.86
SCN1B-206ENST00000638536 CTNSO60931 367 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 TPP2P29144 1249 aaPredicted RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ST13P50502 369 aaKnown RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ARFIP1P53367 373 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 PKNOX1P55347 436 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 GALNT1Q10472 559 aaPredicted RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 TBL3Q12788 808 aaKnown RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 FCRLBQ6BAA4 426 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ATG14Q6ZNE5 492 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ZNF605Q86T29 641 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 GPR180Q86V85 440 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 KIF2BQ8N4N8 673 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 NFAM1Q8NET5 270 aaPredicted RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ADAMTS18Q8TE60 1221 aa20.39■□□□□ 0.86
SCN1B-206ENST00000638536 ANKRD9Q96BM1 317 aaPredicted RBP20.39■□□□□ 0.86
SCN1B-206ENST00000638536 A0A1W2PR48 441 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ARHGAP10A1A4S6 786 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 CLDN4O14493 209 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 PROM1O43490 865 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 MAN1A2O60476 641 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SEMA3DO95025 777 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 KLK1P06870 262 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 HMOX2P30519 316 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SOX11P35716 441 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ETV4P43268 484 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SLC26A5P58743 744 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 CFAP157Q5JU67 520 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 IGFL2Q6UWQ7 119 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 IGFL3Q6UXB1 125 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 RIPOR1Q6ZS17 1223 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 METTL4Q8N3J2 472 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 Q8NA96 180 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 NPAS2Q99743 824 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SLC29A3Q9BZD2 475 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ACPTQ9BZG2 426 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 EPN3Q9H201 632 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 BRF2Q9HAW0 419 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 PNO1Q9NRX1 252 aaKnown RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 MRPS33Q9Y291 106 aaKnown RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 HEMK1Q9Y5R4 338 aaPredicted RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 GLOD5A6NK44 160 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SLC28A2O43868 658 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 FGF17O60258 216 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 TRIM13O60858 407 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ALPPP05187 535 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 FAM58BPP0C7Q3 252 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 HMGCS1Q01581 520 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 C10orf62Q5T681 223 aaPredicted RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 IRAK1BP1Q5VVH5 260 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SLC6A19Q695T7 634 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 JMJD6Q6NYC1 403 aaPredicted RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ISLR2Q6UXK2 745 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ZCCHC23Q6ZST2 131 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 COMMD6Q7Z4G1 85 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 NUDT13Q86X67 352 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ALOXE3Q9BYJ1 711 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 TRIM4Q9C037 500 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 TEX10Q9NXF1 929 aaPredicted RBP20.38■□□□□ 0.85
SCN1B-206ENST00000638536 PLA2G3Q9NZ20 509 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 ANAPC2Q9UJX6 822 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms