RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 DYRK3O43781 588 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 SH3BGRLO75368 114 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ITGA10O75578 1167 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ACSL3O95573 720 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ESRRAP11474 423 aaPredicted RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 COX7A2P14406 83 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ZNF24P17028 368 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 HIST1H1TP22492 207 aaPredicted RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 TLX1P31314 330 aaPredicted RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 ARL1P40616 181 aaPredicted RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 PIK3CBP42338 1070 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 HNRNPFP52597 415 aaKnown RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 ZNF468Q5VIY5 522 aaPredicted RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 OR4C11Q6IEV9 310 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 METTL2BQ6P1Q9 378 aaKnown RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 CYP4Z2PQ8N1L4 340 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ARMC10Q8N2F6 343 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 POGLUT1Q8NBL1 392 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 MORN4Q8NDC4 146 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 FRMD6Q96NE9 622 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 CSF3RQ99062 836 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 SH3BGRL2Q9UJC5 107 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 TMCO1Q9UM00 188 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 NPIPA1Q9UND3 350 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 ERVK-11Q9UQG0 969 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 YARS2Q9Y2Z4 477 aaKnown RBP17.68■□□□□ 0.42
CLN6-221ENST00000637494 ICE1Q9Y2F5 2266 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 SAP18O00422 153 aaKnown RBP17.67■□□□□ 0.42
CLN6-221ENST00000637494 RTCAO00442 366 aaKnown RBP17.67■□□□□ 0.42
CLN6-221ENST00000637494 UGDHO60701 494 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 SLC19A2O60779 497 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 KRT38O76015 456 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 RBP1P09455 135 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 MTHFD2P13995 350 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 COL8A1P27658 744 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 PPP2R1BP30154 601 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 CA7P43166 264 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 BIKQ13323 160 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 PCBP2Q15366 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLN6-221ENST00000637494 DEPDC1Q5TB30 811 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 HSDL2Q6YN16 418 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 SLC34A3Q8N130 599 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 GHDCQ8N2G8 530 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 HUS1BQ8NHY5 278 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 SCYL1Q96KG9 808 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 MAPKAP1Q9BPZ7 522 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 TSPAN10Q9H1Z9 355 aaPredicted RBP17.67■□□□□ 0.42
CLN6-221ENST00000637494 CDC42EP4Q9H3Q1 356 aaKnown RBP17.67■□□□□ 0.42
CLN6-221ENST00000637494 IPPKQ9H8X2 491 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 TIMMDC1Q9NPL8 285 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 COPS7AQ9UBW8 275 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 VTI1BQ9UEU0 232 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 PHF11Q9UIL8 331 aa17.67■□□□□ 0.42
CLN6-221ENST00000637494 TGFBR3LH3BV60 316 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 ASNA1O43681 348 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 ALDOAP04075 364 aaKnown RBP17.66■□□□□ 0.42
CLN6-221ENST00000637494 ABOP16442 354 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 PTX3P26022 381 aaPredicted RBP17.66■□□□□ 0.42
CLN6-221ENST00000637494 CNTFP26441 200 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 DCTP40126 519 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 ARFIP1P53367 373 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 SLAMF1Q13291 335 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 GTF2H2Q13888 395 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 TSNAXIP1Q2TAA8 658 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 GTF2H2CQ6P1K8 395 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 RPTNQ6XPR3 784 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 ZNF793Q6ZN11 406 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 UBE3DQ7Z6J8 389 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 GPALPP1Q8IXQ4 340 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 SLC44A1Q8WWI5 657 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 ASB15Q8WXK1 588 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 MTERF1Q99551 399 aaKnown RBP17.66■□□□□ 0.42
CLN6-221ENST00000637494 FUT8Q9BYC5 575 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 OR8D2Q9GZM6 311 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 OR51B5Q9H339 312 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 DMGDHQ9UI17 866 aaKnown RBP17.66■□□□□ 0.42
CLN6-221ENST00000637494 TSC22D4Q9Y3Q8 395 aa17.66■□□□□ 0.42
CLN6-221ENST00000637494 SPTBN1Q01082 2364 aaKnown RBP17.65■□□□□ 0.42
CLN6-221ENST00000637494 HMX2A2RU54 273 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 A8MVJ9 347 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 C17orf105B2RV13 164 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 POC1B-GALNT4F8VUJ3 575 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 KLK8O60259 260 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 LDB3O75112 727 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 SMIM24O75264 130 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 SCELO95171 688 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 BUD31P41223 144 aaPredicted RBP17.65■□□□□ 0.42
CLN6-221ENST00000637494 MEOX1P50221 254 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 ZNF787Q6DD87 383 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 GOLGA7Q7Z5G4 137 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 SPPL2CQ8IUH8 684 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 EID3Q8N140 333 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 OR5L2Q8NGL0 311 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 DGAT2Q96PD7 388 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 PAFAH2Q99487 392 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 DMRT3Q9NQL9 472 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 HPF1Q9NWY4 346 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 CLDN16Q9Y5I7 305 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms