RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 GK5Q6ZS86 529 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 ADAMTSL2Q86TH1 951 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 C7orf57Q8NEG2 295 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 MYRIPQ8NFW9 859 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 KIAA1191Q96A73 305 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 SMC6Q96SB8 1091 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 LIN28AQ9H9Z2 209 aaKnown RBP15.21■□□□□ 0.03
CLN3-255ENST00000637100 POPDC3Q9HBV1 291 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 MOCS1Q9NZB8 636 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 LIPGQ9Y5X9 500 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 PSAT1Q9Y617 370 aa15.21■□□□□ 0.03
CLN3-255ENST00000637100 ZNF469Q96JG9 3925 aaPredicted RBP15.2■□□□□ 0.02
CLN3-255ENST00000637100 PRRC2AP48634 2157 aaKnown RBP15.2■□□□□ 0.02
CLN3-255ENST00000637100 A0A0G2JNJ9 132 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 NPEPPSL1A6NEC2 478 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 TP73O15350 636 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 TAPBPO15533 448 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 HCN1O60741 890 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 WDR1O75083 606 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 SCELO95171 688 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 RNF4P78317 190 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 IGLV3-21P80748 117 aaPredicted RBP15.2■□□□□ 0.02
CLN3-255ENST00000637100 SLC13A2Q13183 592 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 RCN2Q14257 317 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 MORF4L2Q15014 288 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 ZNF750Q32MQ0 723 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 PIGGQ5H8A4 983 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 UBE3DQ7Z6J8 389 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 KRT78Q8N1N4 520 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 OR5M3Q8NGP4 307 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 OSBPL9Q96SU4 736 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 CSF3RQ99062 836 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 ALOXE3Q9BYJ1 711 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 REXO4Q9GZR2 422 aaKnown RBP15.2■□□□□ 0.02
CLN3-255ENST00000637100 LYRM4Q9HD34 91 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 Q9UFV3 132 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 CLCA3PQ9Y6N3 262 aa15.2■□□□□ 0.02
CLN3-255ENST00000637100 A0A0G2JN53 185 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 FAM166BA8MTA8 275 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 WWP2O00308 870 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 WDR47O94967 919 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 IGKV3-11P04433 115 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 CD99P14209 185 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ADH7P40394 386 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 CASP2P42575 452 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 MAGEA5P43359 124 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 PLA2G16P53816 162 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 PLGLB1Q02325 96 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 FOLH1Q04609 750 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 PCDH1Q08174 1060 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ILF2Q12905 390 aaKnown RBP15.19■□□□□ 0.02
CLN3-255ENST00000637100 BMPR2Q13873 1038 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 SERTAD2Q14140 314 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 PPP1R7Q15435 360 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 TGFBIQ15582 683 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 TSNQ15631 228 aaKnown RBP15.19■□□□□ 0.02
CLN3-255ENST00000637100 C18orf21Q32NC0 220 aaPredicted RBP15.19■□□□□ 0.02
CLN3-255ENST00000637100 ZNF791Q3KP31 576 aaPredicted RBP15.19■□□□□ 0.02
CLN3-255ENST00000637100 SLC25A35Q3KQZ1 300 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 RIPPLY2Q5TAB7 128 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 TRIM40Q6P9F5 258 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 OPN5Q6U736 354 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 LYPD8Q6UX82 237 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 TGIF2LYQ8IUE0 185 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 PDIK1LQ8N165 341 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ZNF321PQ8N8H1 164 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 FAM47BQ8NA70 645 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 OR5L2Q8NGL0 311 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ZNF721Q8TF20 911 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 TMEM79Q9BSE2 394 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 DERL2Q9GZP9 239 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 SACM1LQ9NTJ5 587 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ATG4BQ9Y4P1 393 aa15.19■□□□□ 0.02
CLN3-255ENST00000637100 ANKHD1Q8IWZ3 2542 aaKnown RBP15.19■□□□□ 0.02
CLN3-255ENST00000637100 HRNRQ86YZ3 2850 aaPredicted RBP15.18■□□□□ 0.02
CLN3-255ENST00000637100 FAM95CA0A1B0GW59 222 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 ANKDD1BA6NHY2 528 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 SYT5O00445 386 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 HOXB4P17483 251 aaPredicted RBP15.18■□□□□ 0.02
CLN3-255ENST00000637100 EPORP19235 508 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 CD22P20273 847 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 ENDOUP21128 410 aaKnown RBP15.18■□□□□ 0.02
CLN3-255ENST00000637100 SAT1P21673 171 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 CERS1P27544 350 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 MGAT5Q09328 741 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 SLC10A1Q14973 349 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 ADNP2Q6IQ32 1131 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 OR5M9Q8NGP3 310 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 NUBPLQ8TB37 319 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 SLC2A12Q8TD20 617 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 PAQR8Q8TEZ7 354 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 NRGNQ92686 78 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 ANKRD9Q96BM1 317 aaPredicted RBP15.18■□□□□ 0.02
CLN3-255ENST00000637100 SARAFQ96BY9 339 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 EGFL8Q99944 293 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 PROK2Q9HC23 129 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 ACKR4Q9NPB9 350 aa15.18■□□□□ 0.02
CLN3-255ENST00000637100 PPANQ9NQ55 473 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms