RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CLCA4Q14CN2 919 aa11□□□□□ -0.65
CLN6-217ENST00000636964 MLF2Q15773 248 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 UGT8Q16880 541 aa11□□□□□ -0.65
CLN6-217ENST00000636964 LAIR2Q6ISS4 152 aa11□□□□□ -0.65
CLN6-217ENST00000636964 LCN8Q6JVE9 175 aa11□□□□□ -0.65
CLN6-217ENST00000636964 RIMKLAQ8IXN7 391 aa11□□□□□ -0.65
CLN6-217ENST00000636964 OXR1Q8N573 874 aa11□□□□□ -0.65
CLN6-217ENST00000636964 DHRSXQ8N5I4 330 aa11□□□□□ -0.65
CLN6-217ENST00000636964 HMGB4Q8WW32 186 aa11□□□□□ -0.65
CLN6-217ENST00000636964 JPH3Q8WXH2 748 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 ZNF583Q96ND8 569 aa11□□□□□ -0.65
CLN6-217ENST00000636964 REXO4Q9GZR2 422 aaKnown RBP11□□□□□ -0.65
CLN6-217ENST00000636964 FGF22Q9HCT0 170 aa11□□□□□ -0.65
CLN6-217ENST00000636964 SERHLQ9NQF3 203 aa11□□□□□ -0.65
CLN6-217ENST00000636964 PRDM8Q9NQV8 689 aa11□□□□□ -0.65
CLN6-217ENST00000636964 SMPD3Q9NY59 655 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 ATP6V1HQ9UI12 483 aa11□□□□□ -0.65
CLN6-217ENST00000636964 POLHQ9Y253 713 aa11□□□□□ -0.65
CLN6-217ENST00000636964 TCRBV21S2A2A0A5A6 115 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 A6NCN8 305 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 PI15O43692 258 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 DRD1P21728 446 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 GP2P55259 537 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 OLR1P78380 273 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CYP4F3Q08477 520 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 ZIK1Q3SY52 487 aaPredicted RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 ZC3H12BQ5HYM0 836 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 ATG9BQ674R7 924 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 DTWD1Q8N5C7 304 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 NDNFQ8TB73 568 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 FIG4Q92562 907 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CENPNQ96H22 339 aaPredicted RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 SORBS1Q9BX66 1292 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 NCKAP1Q9Y2A7 1128 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 FEZF1A0PJY2 475 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 YY2O15391 372 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 UGT2B11O75310 529 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CPSF4O95639 269 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 LAMP1P11279 417 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 KRT33BQ14525 404 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 HIST2H2ACQ16777 129 aaPredicted RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 TPRG1LQ5T0D9 272 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 SHEQ5VZ18 495 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 HIST2H2AA3Q6FI13 130 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 DEPDC4Q8N2C3 294 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 PGBD3Q8N328 593 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 BIRC7Q96CA5 298 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 EFHD1Q9BUP0 239 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 TRIM15Q9C019 465 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 RMND5AQ9H871 391 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CARS2Q9HA77 564 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 RUVBL1Q9Y265 456 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 SNX8Q9Y5X2 465 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 SERTM1A2A2V5 107 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 AQP12BA6NM10 295 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 B8ZZF3 427 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 H7BY64 318 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 RFXANKO14593 260 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 NOL3O60936 208 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 PSMA4P25789 261 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 TMEM236Q5W0B7 351 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 ENPP7Q6UWV6 458 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 R3HCC1LQ7Z5L2 792 aaKnown RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 PLD3Q8IV08 490 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 AQP12AQ8IXF9 295 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 FRMD1Q8N878 549 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 WDR48Q8TAF3 677 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 CHTF18Q8WVB6 975 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 MAGED4Q96JG8 741 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 PRAP1Q96NZ9 151 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 C9orf16Q9BUW7 83 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 EFCAB11Q9BUY7 163 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 BTBD1Q9H0C5 482 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 PAK1IP1Q9NWT1 392 aaPredicted RBP10.99□□□□□ -0.65
CLN6-217ENST00000636964 ENPP5Q9UJA9 477 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 LAMP5Q9UJQ1 280 aa10.99□□□□□ -0.65
CLN6-217ENST00000636964 TCRBV5S2A0A599 114 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 CACNB4O00305 520 aaPredicted RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 ABCB7O75027 752 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PRPS1L1P21108 318 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 CRHBPP24387 322 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 EEF1B2P24534 225 aaKnown RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 AK4P27144 223 aaPredicted RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 HTR1EP28566 365 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 ALDH4A1P30038 563 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 TPMTP51580 245 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 RUNDC3AQ59EK9 446 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PAGE2BQ5JRK9 111 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 UBE2UQ5VVX9 321 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 Q6ZS52 159 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 C17orf64Q86WR6 236 aa10.98□□□□□ -0.65
CLN6-217ENST00000636964 PTRH1Q86Y79 214 aaKnown RBP10.98□□□□□ -0.65
CLN6-217ENST00000636964 CLEC4FQ8N1N0 589 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms