RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KCTD7Q96MP8 289 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ITM2CQ9NQX7 267 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 DHDHQ9UQ10 334 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 NUDT21O43809 227 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 PRICKLE3O43900 615 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 SLC18A2Q05940 514 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 OR2AP1Q8NGE2 309 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 GPR88Q9GZN0 384 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 PTRH2Q9Y3E5 179 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 DISC1C4P0D8 188 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 SLC16A8O95907 504 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 NPR2P20594 1047 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 FAM3CQ92520 227 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 HTR3BO95264 441 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 DPYSL2Q16555 572 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 LRRC18Q8N456 261 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 AKTIPQ9H8T0 292 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 TAS2R9Q9NYW1 312 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 LCKP06239 509 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 PRKCAP17252 672 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 LIMK2P53671 638 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 NTHL1P78549 312 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ELP5Q8TE02 316 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 RLN3Q8WXF3 142 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 HSPA12BQ96MM6 686 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 EBF4Q9BQW3 602 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 OR14J1Q9UGF5 321 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 A0A1B0GVC2 190 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 NXPH3O95157 252 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ASGR2P07307 311 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 L1CAMP32004 1257 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 POLR2HP52434 150 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ZNF136P52737 540 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 SHFQ7M4L6 423 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 MAFIPQ8WZ33 124 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 LMF1Q96S06 567 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 RANBP3Q9H6Z4 567 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 WDR45Q9Y484 360 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 F5H5K5 113 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 CRISP1P54107 249 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 TPGS2Q68CL5 300 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 OR52W1Q6IF63 320 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ACTR6Q9GZN1 396 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 A0A0U1RQS6 177 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 GPR4P46093 362 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 PSPHP78330 225 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 RUNDC3AQ59EK9 446 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 TMIGD1Q6UXZ0 262 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 DPY19L3Q6ZPD9 716 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ZFP41Q8N8Y5 198 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 PSKH2Q96QS6 385 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 PCTPQ9UKL6 214 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 RARRES3Q9UL19 164 aa17.16■□□□□ 0.34
CACNA1A-227ENST00000636549 ZNF99A8MXY4 864 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 TPSB2P20231 275 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SMSP52788 366 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ANKDD1AQ495B1 522 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SYT14Q8NB59 555 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CLEC1AQ8NC01 280 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 OR9A1PQ8NGU1 263 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SOX17Q9H6I2 414 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SRRDQ9UH36 339 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ANKRD28O15084 1053 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 IL32P24001 234 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 TM4SF1P30408 202 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CCL11P51671 97 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CLDN2P57739 230 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 NPTX1Q15818 432 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 IRF2BP2Q7Z5L9 587 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 NUP43Q8NFH3 380 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ANKRA2Q9H9E1 313 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CLEC3BP05452 202 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 PRPS2P11908 318 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 GDF1P27539 372 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 APLNRP35414 380 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ABRAXAS2Q15018 415 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 OR4K14Q8NGD5 310 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 RNF215Q9Y6U7 377 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 PIAS3Q9Y6X2 628 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 MEIS3P1A6NDR6 274 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CASC3O15234 703 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 XPNPEP2O43895 674 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 MAGEA8P43361 318 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 AKR1C2P52895 323 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CASP7P55210 303 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ERV3-1Q14264 604 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 FRG2Q64ET8 278 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SLC37A3Q8NCC5 494 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 CREB3L4Q8TEY5 395 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 IL1F10Q8WWZ1 152 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms