RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CCNYL2Q5T2Q4 361 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 AMER3Q8N944 861 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ACOT4Q8N9L9 421 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 CEP70Q8NHQ1 597 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 MMABQ96EY8 250 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 QRFPRQ96P65 431 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ZPBPQ9BS86 351 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 DDA1Q9BW61 102 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ZNF717Q9BY31 904 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 LHX9Q9NQ69 397 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 G3BP2Q9UN86 482 aaKnown RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 POMPQ9Y244 141 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 MAU2Q9Y6X3 613 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 A0A1B0GX78 115 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 GNG14A0A1W2PPG7 69 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 C9orf172C9J069 976 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 E9PBE3 544 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 B3GALT2O43825 422 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 PCDH7O60245 1069 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 KLHL41O60662 606 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 RDH16O75452 317 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 LYNP07948 512 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 ANXA4P09525 319 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 TIA1P31483 386 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 ARFIP1P53367 373 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 SKP1P63208 163 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 OLR1P78380 273 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 RAE1P78406 368 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 KIAA0040Q15053 153 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 OGFRL1Q5TC84 451 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 IL23RQ5VWK5 629 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 RHBDD2Q6NTF9 364 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 CYP20A1Q6UW02 462 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 SLC38A9Q8NBW4 561 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 METTL2AQ96IZ6 378 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 ADAM29Q9UKF5 820 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 CDC14AQ9UNH5 594 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 EIF3LQ9Y262 564 aaKnown RBP13.67□□□□□ -0.22
LINC00339-208ENST00000634934 TMED5Q9Y3A6 229 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 PCDHGA8Q9Y5G5 932 aa13.67□□□□□ -0.22
LINC00339-208ENST00000634934 LAMA5O15230 3695 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 H0YJX3 145 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 NSA2O95478 260 aaKnown RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 PRR35P0CG20 571 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 UQCRBP14927 111 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 MAPK1P28482 360 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 TPP2P29144 1249 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 OR1D4P47884 311 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 MAPK12P53778 367 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 ERVK-8P63133 956 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 ROR2Q01974 943 aaKnown RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 EMX2Q04743 252 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 MAD2L1Q13257 205 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 SLAMF1Q13291 335 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 TMEM198Q66K66 360 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 NIPAL1Q6NVV3 410 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 OR5T3Q8NGG3 340 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 CDC26Q8NHZ8 85 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 COL26A1Q96A83 441 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 MARK4Q96L34 752 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 TSC22D3Q99576 134 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 YIPF2Q9BWQ6 316 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 FOXJ2Q9P0K8 574 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 HCN3Q9P1Z3 774 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 CNOT11Q9UKZ1 510 aaKnown RBP13.66□□□□□ -0.22
LINC00339-208ENST00000634934 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 PCDHGA3Q9Y5H0 932 aa13.66□□□□□ -0.22
LINC00339-208ENST00000634934 A0A0A6YYD5 115 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 UBDO15205 165 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 DENRO43583 198 aaKnown RBP13.65□□□□□ -0.22
LINC00339-208ENST00000634934 TMPRSS11DO60235 418 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 DNAJB6O75190 326 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 STK17BO94768 372 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 SCELO95171 688 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 BCKDHAP12694 445 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 DIO3P55073 304 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 MAT1AQ00266 395 aaKnown RBP13.65□□□□□ -0.22
LINC00339-208ENST00000634934 FOXK2Q01167 660 aa13.65□□□□□ -0.22
LINC00339-208ENST00000634934 ABHD18Q0P651 414 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms