RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 PPP2R1BP30154 601 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 MAGEA12P43365 314 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 HLCSP50747 726 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 RAP1GDS1P52306 607 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 STX4Q12846 297 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 DDX39BQ13838 428 aaKnown RBP16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 GTF2H2Q13888 395 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 SERTAD2Q14140 314 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 DEPDC1Q5TB30 811 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 ZNF468Q5VIY5 522 aaPredicted RBP16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 C1QL3Q5VWW1 255 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 GTF2H2CQ6P1K8 395 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 GALNTL5Q7Z4T8 443 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 C7orf57Q8NEG2 295 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 HUS1BQ8NHY5 278 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 KIF18AQ8NI77 898 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 DAZLQ92904 295 aaKnown RBP16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 NCLNQ969V3 563 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 FRMD6Q96NE9 622 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 MAPKAP1Q9BPZ7 522 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 OR51B5Q9H339 312 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 DMRT3Q9NQL9 472 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 ZNF180Q9UJW8 692 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 FBXW2Q9UKT8 454 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 TMCO1Q9UM00 188 aa16.04■□□□□ 0.16
SPTAN1-214ENST00000628614 A0A087WUV0 522 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 H0YIV9 168 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 NME2P1O60361 137 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 SH3BGRLO75368 114 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 CLDN1O95832 211 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 NME2P22392 152 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 GPR143P51810 404 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 ARFIP1P53367 373 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 MAPKAPK3Q16644 382 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 HIST2H2BCQ6DN03 193 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 OR4C11Q6IEV9 310 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 GOLGA7Q7Z5G4 137 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 FJX1Q86VR8 437 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 PLD6Q8N2A8 252 aaKnown RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 THAP3Q8WTV1 239 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 RELTQ969Z4 430 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 RGMAQ96B86 450 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 MTERF1Q99551 399 aaKnown RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 ALOXE3Q9BYJ1 711 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 MS4A12Q9NXJ0 267 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 VTI1BQ9UEU0 232 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 ZNF223Q9UK11 482 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 NAV2Q8IVL1 2488 aa16.03■□□□□ 0.16
SPTAN1-214ENST00000628614 SVILO95425 2214 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 LRRC14BA6NHZ5 514 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 ITGA10O75578 1167 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 ZFAND5O76080 213 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 SIX3O95343 332 aaPredicted RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 COL6A2P12110 1019 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 CPN2P22792 545 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 SRSF11Q05519 484 aaKnown RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 KRTCAP3Q53RY4 240 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 ZCCHC7Q8N3Z6 543 aaKnown RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 TMEM156Q8N614 296 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 PTGR2Q8N8N7 351 aaPredicted RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 L3MBTL4Q8NA19 623 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 MORN4Q8NDC4 146 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 SCYL1Q96KG9 808 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 GPR137Q96N19 417 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 ZNF358Q9NW07 568 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 XPR1Q9UBH6 696 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 PHF11Q9UIL8 331 aa16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.16
SPTAN1-214ENST00000628614 TRGV8A0A0C4DH27 118 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 PLPP1O14494 284 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 STX16O14662 325 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 LDB3O75112 727 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 SMIM24O75264 130 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 PTX3P26022 381 aaPredicted RBP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 SSR4P51571 173 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 CASP6P55212 293 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 RPS13P62277 151 aaKnown RBP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 ZRSR2Q15696 482 aaKnown RBP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 CPSF6Q16630 551 aaKnown RBP eCLIP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 ZNF227Q86WZ6 799 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 CYP4Z2PQ8N1L4 340 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 RNF175Q8N4F7 328 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 POGLUT1Q8NBL1 392 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 DCAKDQ8WVC6 231 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 PHF21BQ96EK2 531 aa16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 SUCOQ9UBS9 1254 aaKnown RBP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 YARS2Q9Y2Z4 477 aaKnown RBP16.01■□□□□ 0.15
SPTAN1-214ENST00000628614 EXOC1LA0A1B0GW35 172 aa16■□□□□ 0.15
SPTAN1-214ENST00000628614 C17orf105B2RV13 164 aa16■□□□□ 0.15
SPTAN1-214ENST00000628614 TRIM49D1C9J1S8 452 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms