RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 SIRT3Q9NTG7 399 aaPredicted RBP18.67■□□□□ 0.58
TREX1-205ENST00000625293 C5AR2Q9P296 337 aa18.67■□□□□ 0.58
TREX1-205ENST00000625293 DMDP11532 3685 aa18.67■□□□□ 0.58
TREX1-205ENST00000625293 KMT2EQ8IZD2 1858 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 EME2A4GXA9 379 aaPredicted RBP18.66■□□□□ 0.58
TREX1-205ENST00000625293 NOBOXO60393 691 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 CLIC3O95833 236 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 CLPTM1O96005 669 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 STATHP02808 62 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 ARAFP10398 606 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 DRD2P14416 443 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 SOAT1P35610 550 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 RPL5P46777 297 aaKnown RBP18.66■□□□□ 0.58
TREX1-205ENST00000625293 CASP9P55211 416 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 KCNJ10P78508 379 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 ELOAQ14241 798 aaKnown RBP18.66■□□□□ 0.58
TREX1-205ENST00000625293 GAS6Q14393 721 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 KIR2DS3Q14952 304 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 MLC1Q15049 377 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 PRRT3Q5FWE3 981 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 OR2T5Q6IEZ7 315 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 SHQ1Q6PI26 577 aaKnown RBP18.66■□□□□ 0.58
TREX1-205ENST00000625293 SPESP1Q6UW49 350 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 HIPK1Q86Z02 1210 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 OR2L5Q8NG80 312 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 OR2T29Q8NH02 315 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 UCN3Q969E3 161 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 NEURL3Q96EH8 262 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 MACROD1Q9BQ69 325 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 ORAI3Q9BRQ5 295 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 SRMSQ9H3Y6 488 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 EPB41L1Q9H4G0 881 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 NEUROD4Q9HD90 331 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 ACSS1Q9NUB1 689 aaPredicted RBP18.66■□□□□ 0.58
TREX1-205ENST00000625293 EHD3Q9NZN3 535 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 MAP4K5Q9Y4K4 846 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 ASB4Q9Y574 426 aa18.66■□□□□ 0.58
TREX1-205ENST00000625293 TRBV23OR9-2A0A075B6M9 112 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ERI3O43414 337 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 DPM1O60762 260 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 TNFP01375 233 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ALBP02768 609 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 HIST1H1TP22492 207 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 ILF3Q12906 894 aaKnown RBP eCLIP18.65■□□□□ 0.58
TREX1-205ENST00000625293 EIF2B5Q13144 721 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 SCARB2Q14108 478 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ZNF630Q2M218 657 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 KCTD21Q4G0X4 260 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 TOR1AIP1Q5JTV8 583 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ANKRD34AQ69YU3 496 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 VN1R4Q7Z5H5 301 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 METTL25Q8N6Q8 603 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ZFPM2Q8WW38 1151 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 SLC22A18Q96BI1 424 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 KCNC2Q96PR1 638 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 MBOAT4Q96T53 435 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 NLNQ9BYT8 704 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 TCEAL2Q9H3H9 227 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 APOBEC3BQ9UH17 382 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 OR2A25A4D2G3 310 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 SUV39H1O43463 412 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 B4GALT2O60909 372 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ATP5A1P25705 553 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 AQP1P29972 269 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 TSFMP43897 325 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 MANFP55145 182 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 ITGA1P56199 1179 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 PCBP3P57721 371 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 PPP1R8Q12972 351 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 NDUFAF5Q5TEU4 345 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 PRSS33Q8NF86 280 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 ZFP28Q8NHY6 868 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 NFKBIDQ8NI38 313 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 EXOSC8Q96B26 276 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 ZBED6CLQ96FA7 236 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 OR2A14Q96R47 310 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 DOHHQ9BU89 302 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 CLK4Q9HAZ1 481 aaKnown RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 ADPRHL2Q9NX46 363 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 IFT80Q9P2H3 777 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 TMEFF2Q9UIK5 374 aaPredicted RBP18.65■□□□□ 0.58
TREX1-205ENST00000625293 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 SNX11Q9Y5W9 270 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 CACNA1IQ9P0X4 2223 aa18.65■□□□□ 0.58
TREX1-205ENST00000625293 SPTY2D1-AS1A0A0U1RR47 76 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 hCG_2039718K7EN88 272 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 TNFSF14O43557 240 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 E2F6O75461 281 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 CD6P30203 668 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 UBE2IP63279 158 aaKnown RBP18.64■□□□□ 0.57
TREX1-205ENST00000625293 SELENOWP63302 87 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 CDK6Q00534 326 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 EPS8Q12929 822 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 GPR18Q14330 331 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 ZIK1Q3SY52 487 aaPredicted RBP18.64■□□□□ 0.57
TREX1-205ENST00000625293 TSEN54Q7Z6J9 526 aaKnown RBP18.64■□□□□ 0.57
TREX1-205ENST00000625293 SATL1Q86VE3 508 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 OFCC1Q8IZS5 231 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 ACOT4Q8N9L9 421 aa18.64■□□□□ 0.57
TREX1-205ENST00000625293 DTWD2Q8NBA8 298 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms