RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RCN3Q96D15 328 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MTERF3Q96E29 417 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 RNF31Q96EP0 1072 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CTRCQ99895 268 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 SLC52A3Q9NQ40 469 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 KCMF1Q9P0J7 381 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 HCN3Q9P1Z3 774 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CLCA2Q9UQC9 943 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 LOXL2Q9Y4K0 774 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 SPACA6W5XKT8 324 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 FER1L5A0AVI2 2057 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CNOT1A5YKK6 2376 aaKnown RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 A0A1W2PP18 115 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 BBIP1A8MTZ0 92 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 TM4SF5O14894 197 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 DSCR3O14972 297 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 POLR1CO15160 346 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PROM1O43490 865 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PRKRAO75569 313 aaKnown RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 SCRG1O75711 98 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 ATXN8OSP0DMR3 200 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 NR2F6P10588 404 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 FGF5P12034 268 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 DRD2P14416 443 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MNAT1P51948 309 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 TNFRSF17Q02223 184 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PDE7AQ13946 482 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 REP15Q6BDI9 236 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MVB12AQ96EY5 273 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 RAB3IPQ96QF0 476 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 NPAS2Q99743 824 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MS4A12Q9NXJ0 267 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 NDUFAF1Q9Y375 327 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PCDHA9Q9Y5H5 950 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MAU2Q9Y6X3 613 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CEP250Q9BV73 2442 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 A0A1B0GX78 115 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 GLOD5A6NK44 160 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 H0YIG0 161 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 FBP2O00757 339 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 AIM2O14862 343 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 CHST10O43529 356 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 DKK1O94907 266 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 TIAF1O95411 115 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 LAMP1P11279 417 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 CEACAM1P13688 526 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 TLX1P31314 330 aaPredicted RBP16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 NOVA1P51513 510 aaKnown RBP16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 MXRA7P84157 204 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 SHC2P98077 582 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 OR4F3Q6IEY1 312 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 FAM47BQ8NA70 645 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 UCN3Q969E3 161 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 LIN37Q96GY3 246 aaPredicted RBP16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 CSF3RQ99062 836 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 RTKNQ9BST9 563 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 DUSP26Q9BV47 211 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 WDR41Q9HAD4 459 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 FBXO8Q9NRD0 319 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 ATAD3AQ9NVI7 634 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC39A1Q9NY26 324 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 CDC14AQ9UNH5 594 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 KNTC1P50748 2209 aa16.83■□□□□ 0.28
PTCHD3-202ENST00000622555 SPEGQ15772 3267 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 C1orf226A1L170 272 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 ASPDHA6ND91 283 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 B4E171 279 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 MRASO14807 208 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 SLC30A4O14863 429 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 TSPAN7P41732 249 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 RAB38P57729 211 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 PHC1P78364 1004 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 MAT1AQ00266 395 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 ZNF385BQ569K4 471 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 C1orf189Q5VU69 101 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 CAMKMTQ7Z624 323 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 OR8J2Q8NGG1 315 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 COQ8BQ96D53 544 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 EFCAB1Q9HAE3 211 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 CLK4Q9HAZ1 481 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 C5AR2Q9P296 337 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 LEF1Q9UJU2 399 aaPredicted RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 CDV3Q9UKY7 258 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 TMEM184BQ9Y519 407 aaPredicted RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 PCDHB3Q9Y5E6 796 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 NUP214P35658 2090 aaPredicted RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 B2RBV5 119 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 PGRMC2O15173 223 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 RNH1P13489 461 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 DDX5P17844 614 aaKnown RBP16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 ITIH1P19827 911 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 OR1D4P47884 311 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 NUDT2P50583 147 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 TLR1Q15399 786 aa16.82■□□□□ 0.28
PTCHD3-202ENST00000622555 SYT16Q17RD7 645 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms