RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 L3HYPDHQ96EM0 354 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PPP3R2Q96LZ3 170 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TGIF2Q9GZN2 237 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 OR51J1Q9H342 316 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TUBB1Q9H4B7 451 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RERGLQ9H628 205 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 BRD9Q9H8M2 597 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RAD18Q9NS91 495 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MYEF2Q9P2K5 600 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 RNF24Q9Y225 148 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ZNF451Q9Y4E5 1061 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 A0A1B0GTQ1 180 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 ADAM12O43184 909 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 CD63P08962 238 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 FAM157BP0CG42 384 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 GOT1P17174 413 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SYN1P17600 705 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 NNMTP40261 264 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 KCNJ3P48549 501 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 FNTBP49356 437 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TKTL1P51854 596 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TSPAN5P62079 268 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUSP4Q13115 394 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 CAMK2DQ13557 499 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SSX1Q16384 188 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DPYSL2Q16555 572 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 LHFPL2Q6ZUX7 228 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SHFQ7M4L6 423 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 OTOP2Q7RTS6 562 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 ZFAND4Q86XD8 727 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 MCATQ8IVS2 390 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 C4orf19Q8IY42 314 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PRSS58Q8IYP2 241 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PGBD5Q8N414 524 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 OR2T35Q8NGX2 323 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PHOSPHO2Q8TCD6 241 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TSPAN17Q96FV3 270 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 HRASLS5Q96KN8 279 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PFDN5Q99471 154 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PKMYT1Q99640 499 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 CMSS1Q9BQ75 279 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 MAGEB5Q9BZ81 275 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 XYLT2Q9H1B5 865 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 GAREM1Q9H706 876 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 REEP1Q9H902 201 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 ZNF334Q9HCZ1 680 aaPredicted RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 SCP2D1Q9UJQ7 156 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 A0A1B0GW55 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TMEM82A0PJX8 343 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 EFCAB7A8K855 629 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 K7ERI5 159 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SULT1C2O00338 296 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 KPNA3O00505 521 aaPredicted RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 SSNA1O43805 119 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 RGS11O94810 467 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DIRAS1O95057 198 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SIX3O95343 332 aaPredicted RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 NMBP08949 121 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L2P0CJ85 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L3P0CJ86 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L4P0CJ87 422 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L5P0CJ88 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L6P0CJ89 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4L7P0CJ90 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PAMP19021 973 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 CXCL3P19876 107 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 ATXN1P54253 815 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 DEFA6Q01524 100 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 MC2RQ01718 297 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DOC2AQ14183 400 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 LRRC32Q14392 662 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TARBP2Q15633 366 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 CHRNA6Q15825 494 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PRAMEF19Q5SWL8 479 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 MLIPQ5VWP3 458 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 RGMBQ6NW40 437 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 CNIH2Q6PI25 160 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 Q6ZPB1 254 aaPredicted RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 TRMT11Q7Z4G4 463 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 IL17RCQ8NAC3 791 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 WDR20Q8TBZ3 569 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 HGDQ93099 445 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 POP5Q969H6 163 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 SLC25A46Q96AG3 418 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PIWIL1Q96J94 861 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 MSLNLQ96KJ4 702 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 TMEM209Q96SK2 561 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 MRPL45Q9BRJ2 306 aaKnown RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 TMEM43Q9BTV4 400 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 PARD6GQ9BYG4 376 aaPredicted RBP7.59□□□□□ -1.19
VPS11-209ENST00000622309 EVA1AQ9H8M9 152 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 EQTNQ9NQ60 294 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 RNF146Q9NTX7 359 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 ASH2LQ9UBL3 628 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 DUX4Q9UBX2 424 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 KIAA1217Q5T5P2 1943 aa7.59□□□□□ -1.19
VPS11-209ENST00000622309 SMIM30A4D0T7 59 aa7.59□□□□□ -1.2
VPS11-209ENST00000622309 ERI2A8K979 691 aaKnown RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms