RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CDADC1Q9BWV3 514 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MS4A8Q9BY19 250 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 PITHD1Q9GZP4 211 aaPredicted RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RACGAP1Q9H0H5 632 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR52A5Q9H2C5 316 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 CXorf36Q9H7Y0 433 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 NMNAT1Q9HAN9 279 aaPredicted RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC25A19Q9HC21 320 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRM3Q9NNZ6 103 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 WASH6PQ9NQA3 447 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 INIPQ9NRY2 104 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 GPR83Q9NYM4 423 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SPATA7Q9P0W8 599 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ANKMY1Q9P2S6 941 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MKLN1Q9UL63 735 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RAB23Q9ULC3 237 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MGAT4BQ9UQ53 548 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 IFT52Q9Y366 437 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MAP4K5Q9Y4K4 846 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 PEX16Q9Y5Y5 336 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 CFAP20Q9Y6A4 193 aaKnown RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 MN1Q10571 1320 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 A0A075B6Q4 140 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 EDDM13A0A1B0GTR0 161 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 SAP18O00422 153 aaKnown RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 TLL1O43897 1013 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ATP6V1G1O75348 118 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 PDE9AO76083 593 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLITRK5O94991 958 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 MFN2O95140 757 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 SNX4O95219 450 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 GASTP01350 101 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 GBAP04062 536 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 CYP17A1P05093 508 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 POU2F2P09086 479 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 DBTP11182 482 aaKnown RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 CSF2RAP15509 400 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 DDCP20711 480 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 CXCR2P25025 360 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 WEE1P30291 646 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 SOAT1P35610 550 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 BSGP35613 385 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 HSD17B2P37059 387 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 NUDT6P53370 316 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 UGT2B15P54855 530 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 CASP9P55211 416 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 REEP5Q00765 189 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 MEF2AQ02078 507 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 RHAGQ02094 409 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ILKQ13418 452 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 PUM1Q14671 1186 aaKnown RBP eCLIP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 POM121L1PQ3SYA9 428 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 TIMM50Q3ZCQ8 353 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 COLEC12Q5KU26 742 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 TPRG1LQ5T0D9 272 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 C12orf73Q69YU5 71 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 PLAG1Q6DJT9 500 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRMT11Q7Z4G4 463 aaKnown RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 C11orf96Q7Z7L8 435 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 PDZD3Q86UT5 571 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 HORMAD2Q8N7B1 307 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 LMNTD1Q8N9Z9 388 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 AQP11Q8NBQ7 271 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF740Q8NDX6 193 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM46DQ8NEK8 389 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 B3GNT7Q8NFL0 401 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 GPR32P1Q8NGA4 272 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR52J3Q8NH60 311 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR5AK3PQ8NH89 298 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 UTP15Q8TED0 518 aaKnown RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR8D1Q8WZ84 308 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 COX14Q96I36 57 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZSWIM3Q96MP5 696 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 QRFPRQ96P65 431 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 FUZQ9BT04 418 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF717Q9BY31 904 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 UCK2Q9BZX2 261 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR51E2Q9H255 320 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 SIAEQ9HAT2 523 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZBTB20Q9HC78 741 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 MS4A12Q9NXJ0 267 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 REV1Q9UBZ9 1251 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMCC3Q9ULS5 477 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 WDR37Q9Y2I8 494 aa9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZBBXA8MT70 800 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 HIDE1A8MVS5 230 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 C5orf58C9J3I9 102 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 LOC110117498-PIK3R3F6TDL0 507 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 K7ESM1 405 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAAHO00519 579 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 PLPP1O14494 284 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 FFAR1O14842 300 aa9.15□□□□□ -0.94
IGHV3-54-201ENST00000622166 KIAA0355O15063 1070 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms