RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 PCDHGA6Q9Y5G7 932 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 PRAMEF33A0A0G2JMD5 474 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 AREL1O15033 823 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 PRAMEF10O60809 474 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 KCNJ13O60928 360 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SRCP12931 536 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TIA1P31483 386 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 LEPRP48357 1165 aaKnown RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 CDH11P55287 796 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 CDKL1Q00532 357 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ABHD18Q0P651 414 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 PCLAFQ15004 111 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SCGB2B2Q4G0G5 96 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 OR52E8Q6IFG1 317 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 CCDC36Q8IYA8 594 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SP140LQ9H930 580 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SAGE2PA6NJ88 616 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 A8MVJ9 347 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TLX2O43763 284 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF821O75541 412 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 CER1O95813 267 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 BPIP17213 487 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ARSFP54793 590 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ACY1Q03154 408 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 DLX2Q07687 328 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 MAD2L1BPQ15013 274 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 LRIT3Q3SXY7 679 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ABHD17BQ5VST6 288 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TIFABQ6ZNK6 161 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TOE1Q96GM8 510 aaKnown RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 MAP3K3Q99759 626 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 HPF1Q9NWY4 346 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 H3BNX3 289 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 DFNA5O60443 496 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 KDM4BO94953 1096 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 SCGB1D2O95969 90 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 PRH1P02810 166 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 PORP16435 677 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 P2RY2P41231 377 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 GSK3BP49841 420 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 SHC2P98077 582 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF234Q14588 700 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 UNC5DQ6UXZ4 953 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 OR14L1PQ8NHC6 308 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM203Q969S6 136 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 IGKV6D-21A0A0A0MT36 114 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 IGKV6-21A0A0C4DH24 114 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 A0A1W2PP18 115 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 IRF2P14316 349 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 EN2P19622 333 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 AOC1P19801 751 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 CD72P21854 359 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 FAM189A2Q15884 450 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 KIAA0895LQ68EN5 471 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 LIX1LQ8IVB5 337 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 BOLLQ8N9W6 283 aaKnown RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 HPS1Q92902 700 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 APOOQ9BUR5 198 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 HEMK1Q9Y5R4 338 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 GPR37L1O60883 481 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 ENTPD6O75354 484 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 OR9I1Q8NGQ6 314 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 C9orf43Q8TAL5 461 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 SH3PXD2BA1X283 911 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 MERTKQ12866 999 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 C4orf46Q504U0 113 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM35AQ53FP2 167 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 PRAMEF17Q5VTA0 474 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF613Q6PF04 617 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 OR4N5Q8IXE1 308 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 HORMAD2Q8N7B1 307 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 CCNL2Q96S94 520 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-219ENST00000620786 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
CLIP1-219ENST00000620786 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 H2BFMP0C1H6 154 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 OR1E2P47887 323 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 KHDC1Q4VXA5 237 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 IGDCC3Q8IVU1 814 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 SLITRK4Q8IW52 837 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 KRTCAP2Q8N6L1 136 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 NLGN4YQ8NFZ3 816 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 SIGLEC10Q96LC7 697 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 METTL8Q9H825 291 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 UNC119BA6NIH7 251 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 APOC1P02654 83 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 WDR4P57081 412 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GXYLT1Q4G148 440 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 HMGN2P46Q86SG4 172 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 TRIM73Q86UV7 250 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 TOR1AIP2Q8NFQ8 470 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CANT1Q8WVQ1 401 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 EBF2Q9HAK2 575 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 OAZ3Q9UMX2 235 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 DNAJC25-GNG10A0A024R161 153 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms