RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 BEX5Q5H9J7 111 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 MFSD4BQ5TF39 518 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 FBXW10Q5XX13 1052 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TBC1D1Q86TI0 1168 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 ZNF740Q8NDX6 193 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TRPV3Q8NET8 790 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 OR56A3Q8NH54 315 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 NAT14Q8WUY8 206 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TMEM171Q8WVE6 324 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TP53INP1Q96A56 240 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 C11orf24Q96F05 449 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 SLC30A3Q99726 388 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TIMP4Q99727 224 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 LDAHQ9H6V9 325 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 IMPACTQ9P2X3 320 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 VTI1BQ9UEU0 232 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ZFP69BQ9UJL9 534 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ERVK-11Q9UQG0 969 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 DRG1Q9Y295 367 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 CHCHD2Q9Y6H1 151 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 FLNAP21333 2647 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 DOCK7Q96N67 2140 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 A0A088AWK7 358 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 FRG2CA6NGY1 282 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 H7C0C1 242 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 FFAR3O14843 346 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SMAD7O15105 426 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 GPR42O15529 346 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SPRY1O43609 319 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 ENO2P09104 434 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 IL1RNP18510 177 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ZNF10P21506 573 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 COMTP21964 271 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ATP5OP48047 213 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 EIF3EP60228 445 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 DYNLT1P63172 113 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 PCDH1Q08174 1060 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SNTA1Q13424 505 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TNK1Q13470 666 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ADPRMQ3LIE5 342 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CCDC38Q502W7 563 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 PCID2Q5JVF3 399 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 WIPI1Q5MNZ9 446 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 SLC22A10Q63ZE4 541 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CAPN13Q6MZZ7 669 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 BHLHB9Q6PI77 547 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 HSDL2Q6YN16 418 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CYHR1Q6ZMK1 362 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 GALNT7Q86SF2 657 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SPPL2AQ8TCT8 520 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SLC13A3Q8WWT9 602 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 KCNJ9Q92806 393 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SPACA9Q96E40 222 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 PTCHD1Q96NR3 888 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 LRRC1Q9BTT6 524 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ROGDIQ9GZN7 287 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 STOX2Q9P2F5 926 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 TTC7AQ9ULT0 858 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 MRPS33Q9Y291 106 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 DLGAP4Q9Y2H0 992 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 DUSP10Q9Y6W6 482 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 VPS13CQ709C8 3753 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8MH3BSY2 632 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CTNSO60931 367 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TNFSF13O75888 250 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 OR2J2O76002 312 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SLC16A8O95907 504 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 IGKV3-11P04433 115 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SLC25A16P16260 332 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 NAGAP17050 411 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 BMP5P22003 454 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 UGT2B10P36537 528 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 NPY2RP49146 381 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TBPL1P62380 186 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 RNF4P78317 190 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 RUNX1T1Q06455 604 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 POU6F1Q14863 301 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 BRD3Q15059 726 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 NRF1Q16656 503 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 PRR31Q5SQ13 230 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 FAM47EQ6ZV65 393 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 EXOC3L1Q86VI1 746 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 KRT222Q8N1A0 295 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 LINC01560Q8TB33 94 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ZNF721Q8TF20 911 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 RNF138Q8WVD3 245 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ALKBH8Q96BT7 664 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 CTHRC1Q96CG8 243 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 C1orf159Q96HA4 380 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 KIFC1Q9BW19 673 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ANAPC5Q9UJX4 755 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ATP6AP2A0A1C7CYW4 349 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 A0A1W2PNV4 684 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PSMD12O00232 456 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 CCL22O00626 93 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PRKNO60260 465 aaPredicted RBP4.18□□□□□ -1.74
SNCA-213ENST00000618500 ATP6AP2O75787 350 aa4.18□□□□□ -1.74
SNCA-213ENST00000618500 PDE9AO76083 593 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms