RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CTHP32929 405 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PCGF2P35227 344 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 RAB28P51157 221 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 SELENOWP63302 87 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PDE7AQ13946 482 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 TPRG1LQ5T0D9 272 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 LAIR1Q6GTX8 287 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 TSEN54Q7Z6J9 526 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 HORMAD2Q8N7B1 307 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 OR8K5Q8NH50 307 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 TEFMQ96QE5 360 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 CDCA3Q99618 268 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 DPH7Q9BTV6 452 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 C1QTNF2Q9BXJ5 285 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 LHPPQ9H008 270 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 BTBD1Q9H0C5 482 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 MRPS30Q9NP92 439 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 PAK1IP1Q9NWT1 392 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 TUBA8Q9NY65 449 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 RABL2AQ9UBK7 228 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 CORO2BQ9UQ03 480 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 N6AMT1Q9Y5N5 214 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 A0A1W2PS29 197 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 M0R129 80 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 SLC1A7O00341 560 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 PDPK1O15530 556 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 ERI3O43414 337 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 CXCR2P25025 360 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 GPC1P35052 558 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 STT3AP46977 705 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PRDX1Q06830 199 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 CDK5R2Q13319 367 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 DUSP7Q16829 419 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 FGD3Q5JSP0 725 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 ZNF691Q5VV52 312 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 BORAQ6PGQ7 559 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 ZNF773Q6PK81 442 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 CACTIN-AS1Q8N1I8 211 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 RAB42Q8N4Z0 105 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 SYNPO2LQ9H987 977 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 ANKRA2Q9H9E1 313 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 TBC1D29Q9UFV1 150 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 FAM227AF5H4B4 570 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 H3BQ06 376 aaPredicted RBP11.8□□□□□ -0.52
CIITA-212ENST00000618207 TNFRSF11BO00300 401 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 VIPP01282 170 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 HTR1AP08908 422 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 IL1RNP18510 177 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 DDCP20711 480 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 BCL6P41182 706 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 EPS8Q12929 822 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ENPP2Q13822 863 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ARHGAP19Q14CB8 494 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 HEPACAMQ14CZ8 416 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 TEAD4Q15561 434 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 CLPPQ16740 277 aaPredicted RBP11.8□□□□□ -0.52
CIITA-212ENST00000618207 ZNF793Q6ZN11 406 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 SPARTQ8N0X7 666 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 OR9Q2Q8NGE9 314 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 OR5D16Q8NGK9 328 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 CXorf40BQ96DE9 158 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 FEVQ99581 238 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 LMAN2LQ9H0V9 348 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 PREBQ9HCU5 417 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 MAPRE3Q9UPY8 281 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ICKQ9UPZ9 632 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 C4orf51C9J302 202 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 HAT1O14929 419 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 PLRG1O43660 514 aaKnown RBP11.8□□□□□ -0.52
CIITA-212ENST00000618207 TPPPO94811 219 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 SEMG1P04279 462 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ERGP11308 486 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ACADMP11310 421 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ITGA1P56199 1179 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 DSTNP60981 165 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 REEP5Q00765 189 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 DGCR6Q14129 220 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 LRRC32Q14392 662 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 UAP1L1Q3KQV9 507 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 IQCCQ4KMZ1 466 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ZNF542PQ5EBM4 170 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 KDM4DQ6B0I6 523 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 PAGE2Q7Z2X7 111 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 NUDT13Q86X67 352 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 ABHD11Q8NFV4 315 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
CIITA-212ENST00000618207 XAGE5Q8WWM1 108 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 RGMAQ96B86 450 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 RDH12Q96NR8 316 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 AICDAQ9GZX7 198 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 TRPC4Q9UBN4 977 aa11.8□□□□□ -0.52
CIITA-212ENST00000618207 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
CIITA-212ENST00000618207 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
CIITA-212ENST00000618207 H3BMQ9 156 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms