RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 CSTF1Q05048 431 aaKnown RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 Q6ZVL8 140 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CBLL1Q75N03 491 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 YIPF7Q8N8F6 280 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 OR6F1Q8NGZ6 308 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 XAGE5Q8WWM1 108 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 AP3S1Q92572 193 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CLIP3Q96DZ5 547 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 SERHL2Q9H4I8 314 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 SERHLQ9NQF3 203 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ITM2BQ9Y287 266 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ENTPD6O75354 484 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 FGBP02675 491 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 SOD2P04179 222 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 PTNP21246 168 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 HOXD9P28356 352 aaPredicted RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 SDC2P34741 201 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 TGFBR2P37173 567 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 NSG1P42857 185 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 RPS7P62081 194 aaKnown RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 LMAN2Q12907 356 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 KRT33BQ14525 404 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 SHFQ7M4L6 423 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ATP6V1C2Q8NEY4 427 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 KCTD7Q96MP8 289 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 TMED9Q9BVK6 235 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 MED28Q9H204 178 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CLEC2DQ9UHP7 191 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ING4Q9UNL4 249 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 PCDHGB1Q9Y5G3 927 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ZNF638Q14966 1978 aaKnown RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 PRR23D1E9PI22 279 aaPredicted RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CYP17A1P05093 508 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CLEC2LP0C7M8 214 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 PRR23D2P0DMB1 279 aaPredicted RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 PRKCAP17252 672 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ITGB8P26012 769 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 ACVR1Q04771 509 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 E2F2Q14209 437 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 BAK1Q16611 211 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 Q8N402 240 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 RAB8BQ92930 207 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 CCDC120Q96HB5 630 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 RNF121Q9H920 327 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
EPHB4-210ENST00000616502 DYRK1BQ9Y463 629 aa13.75□□□□□ -0.21
EPHB4-210ENST00000616502 TRAV6A0A075B6T7 132 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 ORC5O43913 435 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 EPCAMP16422 314 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 UGT2B10P36537 528 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 FNDC3BQ53EP0 1204 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 TP53INP1Q96A56 240 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 TSSK6Q9BXA6 273 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 CACYBPQ9HB71 228 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 IL26Q9NPH9 171 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 NEU3Q9UQ49 428 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 KCNE2Q9Y6J6 123 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 ZNF646O15015 1829 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 CH25HO95992 272 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 CATP04040 527 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 HOXA9P31269 272 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 LBX1P52954 281 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 ERVFC1P60507 584 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 ARF5P84085 180 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 MEF2AQ02078 507 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 FAM46DQ8NEK8 389 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 TEX12Q9BXU0 123 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 OR51B5Q9H339 312 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 CCDC59Q9P031 241 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 SEC14L4Q9UDX3 406 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 SEC14L3Q9UDX4 400 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 A6NIN4 97 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 MAT2AP31153 395 aaKnown RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 MAP2K3P46734 347 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 CRISP1P54107 249 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 RNF31Q96EP0 1072 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 TMEM80Q96HE8 168 aa13.74□□□□□ -0.21
EPHB4-210ENST00000616502 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-210ENST00000616502 SLC28A2O43868 658 aa13.73□□□□□ -0.21
EPHB4-210ENST00000616502 ALX3O95076 343 aa13.73□□□□□ -0.21
EPHB4-210ENST00000616502 PRLP01236 227 aa13.73□□□□□ -0.21
EPHB4-210ENST00000616502 PRKACBP22694 351 aa13.73□□□□□ -0.21
EPHB4-210ENST00000616502 HMGCLP35914 325 aa13.73□□□□□ -0.21
EPHB4-210ENST00000616502 BUD31P41223 144 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms