RNA–Protein interactions for RNA: ENST00000615842.1

U1.27-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.27-201ENST00000615842 VPS4AQ9UN37 437 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 EXO1Q9UQ84 846 aaKnown RBP8.38□□□□□ -1.07
U1.27-201ENST00000615842 CLCA2Q9UQC9 943 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 ENTPD4Q9Y227 616 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 MRPS33Q9Y291 106 aaKnown RBP8.38□□□□□ -1.07
U1.27-201ENST00000615842 NAALAD2Q9Y3Q0 740 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 PCDHGA1Q9Y5H4 931 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 ZNF780BQ9Y6R6 833 aa8.38□□□□□ -1.07
U1.27-201ENST00000615842 COL5A1P20908 1838 aaPredicted RBP8.38□□□□□ -1.07
U1.27-201ENST00000615842 COL6A3P12111 3177 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 C4orf51C9J302 202 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 ANKRD65E5RJM6 399 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 CLDN4O14493 209 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SH3BP5O60239 455 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SCN2BO60939 215 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 BMP10O95393 424 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 KRT75O95678 551 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 AIFM1O95831 613 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 RNH1P13489 461 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 FOLR1P15328 257 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 IL1RNP18510 177 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 CSNK2A2P19784 350 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 SLC6A2P23975 617 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 MPIP34949 423 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 FRKP42685 505 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 MAGEA8P43361 318 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 MANFP55145 182 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 RAB38P57729 211 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 MC1RQ01726 317 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 ZFP36L1Q07352 338 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 BNIP2Q12982 314 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 GLIPR1L2Q4G1C9 344 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 RUNDC3AQ59EK9 446 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 PIGGQ5H8A4 983 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 PHF19Q5T6S3 580 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 NANOGP8Q6NSW7 305 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 PGM2L1Q6PCE3 622 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 BHLHB9Q6PI77 547 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 RBM44Q6ZP01 1051 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 ZNF621Q6ZSS3 439 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 NET1Q7Z628 596 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 SLITRK4Q8IW52 837 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 AMER3Q8N944 861 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 OR4A15Q8NGL6 344 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 DNAJB14Q8TBM8 379 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 POP5Q969H6 163 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 ZNF501Q96CX3 271 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 BBS4Q96RK4 519 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 MAPKAP1Q9BPZ7 522 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 ECSITQ9BQ95 431 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 THUMPD3Q9BV44 507 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 SPATA9Q9BWV2 254 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 STRADBQ9C0K7 418 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SLC7A5P2Q9GIP4 190 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SPRTNQ9H040 489 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 PAIP1Q9H074 479 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 RPF2Q9H7B2 306 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 NANOGQ9H9S0 305 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 IL1RL2Q9HB29 575 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SERHLQ9NQF3 203 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SEMA3GQ9NS98 782 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 CUTCQ9NTM9 273 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 TEX10Q9NXF1 929 aaPredicted RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 TAS2R9Q9NYW1 312 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 ABCD2Q9UBJ2 740 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 RARRES3Q9UL19 164 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 HCN4Q9Y3Q4 1203 aa8.37□□□□□ -1.07
U1.27-201ENST00000615842 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.37□□□□□ -1.07
U1.27-201ENST00000615842 CACNA1EQ15878 2313 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 A0A0A6YYC8 382 aaPredicted RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 C4orf47A7E2U8 309 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 PROB1E7EW31 1015 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 H3BMH7 237 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 I3L1I5 382 aaPredicted RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 FXYD1O00168 92 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 DSCR3O14972 297 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 CHST10O43529 356 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 HCRTR1O43613 425 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 CBFA2T3O75081 653 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 GMNNO75496 209 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 RFPL3O75679 317 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 SLITRK5O94991 958 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 CPSF4O95639 269 aaKnown RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 IFI6P09912 130 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 HSD17B1P14061 328 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 UQCRC2P22695 453 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 CCKBRP32239 447 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 SLC7A2P52569 658 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 TXNL4AP83876 142 aaKnown RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 TRAP1Q12931 704 aaKnown RBP8.36□□□□□ -1.07
U1.27-201ENST00000615842 RUNX2Q13950 521 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 CEBPEQ15744 281 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 GPR19Q15760 415 aa8.36□□□□□ -1.07
U1.27-201ENST00000615842 ZNF385BQ569K4 471 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms