RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CLEC3AO75596 197 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CASRP41180 1078 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SSR2P43308 183 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 GPR143P51810 404 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 OR4D2P58180 307 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 FOLH1Q04609 750 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 AIMP2Q13155 320 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 LTB4RQ15722 352 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 OR4C11Q6IEV9 310 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ANKRD26P1Q6NSI1 321 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ABHD13Q7L211 337 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 MILR1Q7Z6M3 343 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TRABD2AQ86V40 505 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CPT1CQ8TCG5 803 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TCP10LQ8TDR4 215 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 GAL3ST3Q96A11 431 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ACPTQ9BZG2 426 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF700Q9H0M5 742 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CDCP1Q9H5V8 836 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HEY2Q9UBP5 337 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SLC12A4Q9UP95 1085 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ASB4Q9Y574 426 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF469Q96JG9 3925 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TCRBV16S1A1N1A0A5B0 115 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 PINLYPA6NC86 204 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 WWP2O00308 870 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ITM2AO43736 263 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CLDN9O95484 217 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 AIFM1O95831 613 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 C1QCP02747 245 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CXCR2P25025 360 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TACR1P25103 407 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TNFRSF8P28908 595 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SERPINB9P50453 376 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SLC26A5P58743 744 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HERVK_113P63132 956 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TBL3Q12788 808 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 KLC3Q6P597 504 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 C3P1Q6ZMU1 363 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 WDR53Q7Z5U6 358 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SCUBE1Q8IWY4 988 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 KRT78Q8N1N4 520 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 L3MBTL4Q8NA19 623 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 OR1N1Q8NGS0 311 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 GFM2Q969S9 779 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 WBP1Q96G27 269 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 FAR2Q96K12 515 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ERVK-6Q9BXR3 956 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ALOXE3Q9BYJ1 711 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 OR8D2Q9GZM6 311 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 LHPPQ9H008 270 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 STMN3Q9NZ72 180 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 GPRC5BQ9NZH0 403 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CDC14AQ9UNH5 594 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 PCDHGA9Q9Y5G4 932 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HRH3Q9Y5N1 445 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 UNC79Q9P2D8 2635 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CACNA1DQ01668 2161 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 A0A0A6YYD5 115 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ATP6AP2A0A1C7CYW4 349 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 SYCE1LA8MT33 242 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 J3QKU1 62 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 H2AFYO75367 372 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ATP6AP2O75787 350 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HPP00738 406 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HRH2P25021 359 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 MST1P26927 711 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 COL8A1P27658 744 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 ALDH3A1P30838 453 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CD96P40200 585 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 EMP3P54852 163 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 MRPS35P82673 323 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 KLRB1Q12918 225 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TBCCQ15814 346 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 AGAP7PQ5VUJ5 663 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 YOD1Q5VVQ6 348 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 FRG2Q64ET8 278 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 TRIM40Q6P9F5 258 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 C1orf52Q8N6N3 182 aaKnown RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 BANPQ8N9N5 519 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 CCDC63Q8NA47 563 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 NCLNQ969V3 563 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 FER1L6-AS2Q96M78 137 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 AGAP4Q96P64 663 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 FRG2BQ96QU4 278 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 EFCAB11Q9BUY7 163 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 MID1IP1Q9NPA3 183 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 B3GNT3Q9Y2A9 372 aa5.32□□□□□ -1.56
CPNE3-208ENST00000614678 HEMK1Q9Y5R4 338 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-208ENST00000614678 IQANK1A0A1B0GTG1 560 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 IFNA16P05015 189 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RBP1P09455 135 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 RNH1P13489 461 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SSTR4P31391 388 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 SOX11P35716 441 aa5.31□□□□□ -1.56
CPNE3-208ENST00000614678 FEN1P39748 380 aaKnown RBP5.31□□□□□ -1.56
CPNE3-208ENST00000614678 PRKAA2P54646 552 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms