RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 KLHL1Q9NR64 748 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 PSD3Q9NYI0 1048 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 SEC14L3Q9UDX4 400 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 VTI1BQ9UEU0 232 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 CLCA3PQ9Y6N3 262 aa17■□□□□ 0.31
VCX3A-203ENST00000612369 TRBV11-1A0A0K0K1C0 115 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 TGFBR3LH3BV60 316 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 PTX3P26022 381 aaPredicted RBP16.99■□□□□ 0.31
VCX3A-203ENST00000612369 MST1P26927 711 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 SSR2P43308 183 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 RBPJQ06330 500 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 BIKQ13323 160 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 KRTCAP3Q53RY4 240 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 OR4C11Q6IEV9 310 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 ZNF793Q6ZN11 406 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 MYLK4Q86YV6 388 aaPredicted RBP16.99■□□□□ 0.31
VCX3A-203ENST00000612369 PLD6Q8N2A8 252 aaKnown RBP16.99■□□□□ 0.31
VCX3A-203ENST00000612369 MORN4Q8NDC4 146 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 HUS1BQ8NHY5 278 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 NCLNQ969V3 563 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 TMEM125Q96AQ2 219 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 CSF3RQ99062 836 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 MAPKAP1Q9BPZ7 522 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 ALOXE3Q9BYJ1 711 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 DMRT3Q9NQL9 472 aa16.99■□□□□ 0.31
VCX3A-203ENST00000612369 CPSF2Q9P2I0 782 aaKnown RBP16.99■□□□□ 0.31
VCX3A-203ENST00000612369 STX16-NPEPL1H3BU86 382 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 RTCAO00442 366 aaKnown RBP16.98■□□□□ 0.31
VCX3A-203ENST00000612369 STX16O14662 325 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 SLC25A12O75746 678 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 ZFAND5O76080 213 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 UNC5CO95185 931 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 RAP1GDS1P52306 607 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 KCNK10P57789 538 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 LGSNQ5TDP6 509 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 ZNF468Q5VIY5 522 aaPredicted RBP16.98■□□□□ 0.31
VCX3A-203ENST00000612369 GALNTL5Q7Z4T8 443 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 GOLGA7Q7Z5G4 137 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 CLNKQ7Z7G1 428 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 IFT20Q8IY31 132 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 CNPY4Q8N129 248 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 ZCCHC7Q8N3Z6 543 aaKnown RBP16.98■□□□□ 0.31
VCX3A-203ENST00000612369 L3MBTL4Q8NA19 623 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 OR14A16Q8NHC5 309 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 THAP3Q8WTV1 239 aaPredicted RBP16.98■□□□□ 0.31
VCX3A-203ENST00000612369 HES7Q9BYE0 225 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 OR51B5Q9H339 312 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 FBXW2Q9UKT8 454 aa16.98■□□□□ 0.31
VCX3A-203ENST00000612369 YARS2Q9Y2Z4 477 aaKnown RBP16.98■□□□□ 0.31
VCX3A-203ENST00000612369 A1L4Q6 167 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 POC1B-GALNT4F8VUJ3 575 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 NME2P1O60361 137 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 CLDN9O95484 217 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 IFNA16P05015 189 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 ABHD2P08910 425 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 NME2P22392 152 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 CPN2P22792 545 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 PPP2R1BP30154 601 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 PMP22Q01453 160 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 ALDH6A1Q02252 535 aaKnown RBP16.97■□□□□ 0.31
VCX3A-203ENST00000612369 CUL3Q13618 768 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 DDX39BQ13838 428 aaKnown RBP16.97■□□□□ 0.31
VCX3A-203ENST00000612369 MAPKAPK3Q16644 382 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 TMEM156Q8N614 296 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 PTGR2Q8N8N7 351 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-203ENST00000612369 DCAKDQ8WVC6 231 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 FRMD6Q96NE9 622 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 ZNF358Q9NW07 568 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 PHF11Q9UIL8 331 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 ZNF223Q9UK11 482 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-203ENST00000612369 PPT2Q9UMR5 302 aa16.97■□□□□ 0.31
VCX3A-203ENST00000612369 DIDO1Q9BTC0 2240 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 LRRC14BA6NHZ5 514 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 TRIM49D1C9J1S8 452 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 FOXE1O00358 373 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SMIM24O75264 130 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SH3BGRLO75368 114 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 ITGA10O75578 1167 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SIX3O95343 332 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SNRPAP09012 282 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 TLX1P31314 330 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 ST13P50502 369 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SLAMF1Q13291 335 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 CPSF6Q16630 551 aaKnown RBP eCLIP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 C10orf62Q5T681 223 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 TRMT10CQ7L0Y3 403 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 ZNF227Q86WZ6 799 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 POGLUT1Q8NBL1 392 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 OR8K3Q8NH51 312 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 WDR20Q8TBZ3 569 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 PTPMT1Q8WUK0 201 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 TANKQ92844 425 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 ATP6V1E2Q96A05 226 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 SCYL1Q96KG9 808 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 GPR137Q96N19 417 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 MTERF1Q99551 399 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 MRPL57Q9BQC6 102 aaKnown RBP16.96■□□□□ 0.31
VCX3A-203ENST00000612369 NTMT1Q9BV86 223 aa16.96■□□□□ 0.31
VCX3A-203ENST00000612369 NOL11Q9H8H0 719 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms