RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 PIGXQ8TBF5 258 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 KAT2AQ92830 837 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 XKR8Q9H6D3 395 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 DMRT3Q9NQL9 472 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 MRPS7Q9Y2R9 242 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 TRBV5-4A0A0C4DH59 114 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 FEZF1A0PJY2 475 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 H0YIV9 168 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ANKRD28O15084 1053 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 APOL3O95236 402 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ANK1P16157 1881 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 CSNK2A2P19784 350 aaPredicted RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 CD72P21854 359 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 IL12RB1P42701 662 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 OR2B6P58173 313 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 RAB8AP61006 207 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 DMPKQ09013 629 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SLC5A12Q1EHB4 618 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 KLHL22Q53GT1 634 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ZNF367Q7RTV3 350 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TMEM145Q8NBT3 493 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ARMC5Q96C12 935 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TMEM80Q96HE8 168 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TMEM19Q96HH6 336 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 OR51E2Q9H255 320 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 STMN3Q9NZ72 180 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ZNF624Q9P2J8 865 aaPredicted RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 MALT1Q9UDY8 824 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TMEM202A6NGA9 273 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CDRT1O95170 752 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CD160O95971 181 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CH25HO95992 272 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 FSHRP23945 695 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CMPK1P30085 196 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 PHC1P78364 1004 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 LRRC32Q14392 662 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 GINS1Q14691 196 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 HDDC3Q8N4P3 179 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CHPT1Q8WUD6 406 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 LCN9Q8WX39 176 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 MND1Q9BWT6 205 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 C14orf119Q9NWQ9 140 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 FAM240BA0A1B0GVZ2 78 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 VNN2O95498 520 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 MRPL19P49406 292 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 MTAPQ13126 283 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 DDI2Q5TDH0 399 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 FAM43BQ6ZT52 329 aaPredicted RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 ERN2Q76MJ5 926 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 IQCHQ86VS3 1027 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 MSRB3Q8IXL7 192 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 NRSN1Q8IZ57 195 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 OR5AR1Q8NGP9 310 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 OR6Q1Q8NGQ2 317 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ZCCHC10Q8TBK6 192 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 SETD7Q8WTS6 366 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 DNASE1L2Q92874 299 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 PAWRQ96IZ0 340 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 FCRL4Q96PJ5 515 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 BARD1Q99728 777 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 TSSK6Q9BXA6 273 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 MARCH7Q9H992 704 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 CERS4Q9HA82 394 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 NMNAT1Q9HAN9 279 aaPredicted RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 NCKAP1Q9Y2A7 1128 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 B3GNT3Q9Y2A9 372 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ANHXE9PGG2 379 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 J3KTA2 159 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 NDUFS4O43181 175 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 MRPS14O60783 128 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 C1orf105O95561 183 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 DNTTP04053 509 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ALPPP05187 535 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 MPIP34949 423 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 VIPR2P41587 438 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 PRLHRP49683 370 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 SMSP52788 366 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 IL18Q14116 193 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ELAVL3Q14576 367 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 LARS2Q15031 903 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 PTGES3Q15185 160 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 SPHARQ15513 63 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 KDM4DQ6B0I6 523 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 PARS2Q7L3T8 475 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 RBM12BQ8IXT5 1001 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 CPA6Q8N4T0 437 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 ADAMTS16Q8TE57 1224 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 UFD1Q92890 307 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 RFKQ969G6 155 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 DMRTB1Q96MA1 342 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms