RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ZFP90	Q8TF47	636 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	COQ8B	Q96D53	544 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	HSH2D	Q96JZ2	352 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	DPH2	Q9BQC3	489 aa	Predicted RBP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	ASPSCR1	Q9BZE9	553 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	PRDM6	Q9NQX0	595 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	ASF1A	Q9Y294	204 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	ISPD	A4D126	451 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	MYO1G	B0I1T2	1018 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	PTGES3L	E9PB15	166 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	MITF	O75030	526 aa	Predicted RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLC35G4	P0C7Q5	338 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	EFNA1	P20827	205 aa	Predicted RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	FPR1	P21462	350 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ST13	P50502	369 aa	Known RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	TBPL1	P62380	186 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	IL5RA	Q01344	420 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	PIGF	Q07326	219 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	FADD	Q13158	208 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	TMEM53	Q6P2H8	277 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	SYTL1	Q8IYJ3	562 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	UBALD2	Q8IYN6	164 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	OXR1	Q8N573	874 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	GPR156	Q8NFN8	814 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	DYNC2LI1	Q8TCX1	351 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	WDR34	Q96EX3	536 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	TOE1	Q96GM8	510 aa	Known RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF300	Q96RE9	604 aa	Predicted RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	BARD1	Q99728	777 aa	Known RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	FOXQ1	Q9C009	403 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	CHST8	Q9H2A9	424 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	OSGEPL1	Q9H4B0	414 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ACSL5	Q9ULC5	683 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLC17A4	Q9Y2C5	497 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	DYRK1B	Q9Y463	629 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	GPSM3	Q9Y4H4	160 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	GNG14	A0A1W2PPG7	69 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	C1orf226	A1L170	272 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	hCG_2039718	K7EN88	272 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	KCNJ13	O60928	360 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	HOXC4	P09017	264 aa	Predicted RBP	13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ACP5	P13686	325 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	DAP	P51397	102 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	LRRC74A	Q0VAA2	488 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	CDC20	Q12834	499 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ADPRM	Q3LIE5	342 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	METRNL	Q641Q3	311 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	UNC5D	Q6UXZ4	953 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	BTLA	Q7Z6A9	289 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	VTCN1	Q7Z7D3	282 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	GALNT10	Q86SR1	603 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	CXorf40B	Q96DE9	158 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	SP140L	Q9H930	580 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ANKMY1	Q9P2S6	941 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	ATP6V1H	Q9UI12	483 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	VPS4A	Q9UN37	437 aa		13.25	□□□□□ -0.29
COPS7B-223	ENST00000611614	POM121B	A6NF01	834 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	PCDH7	O60245	1069 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	FKBP9	O95302	570 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	IGLV3-19	P01714	112 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CEACAM5	P06731	702 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	BMP4	P12644	408 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	NPPB	P16860	134 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CD40LG	P29965	261 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CLDN2	P57739	230 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLC35A2	P78381	396 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	VLDLR	P98155	873 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	NPTX1	Q15818	432 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CATSPERE	Q5SY80	951 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	C10orf62	Q5T681	223 aa	Predicted RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	KDM4D	Q6B0I6	523 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	TUBA3E	Q6PEY2	450 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	GALNT5	Q7Z7M9	940 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	PDZD3	Q86UT5	571 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF687	Q8N1G0	1237 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	TFG	Q92734	400 aa	Predicted RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	APOL4	Q9BPW4	351 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	TIMM29	Q9BSF4	260 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	EFCAB11	Q9BUY7	163 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	SGPP1	Q9BX95	441 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CPNE5	Q9HCH3	593 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	SIRT5	Q9NXA8	310 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLC23A2	Q9UGH3	650 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	PCDHGA10	Q9Y5H3	936 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	AP1M2	Q9Y6Q5	423 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	FOXE1	O00358	373 aa	Predicted RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	RNASET2	O00584	256 aa	Known RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	ABCB1	P08183	1280 aa	Predicted RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	C1GALT1C1L	P0DN25	315 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	NR4A1	P22736	598 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	CD6	P30203	668 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	KIAA1024L	P59773	190 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	RAPSN	Q13702	412 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLBP	Q14493	270 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	LAPTM4A	Q15012	233 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	RGN	Q15493	299 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	LAS2	Q8IYD9	372 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR4A15	Q8NGL6	344 aa		13.24	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR9A1P	Q8NGU1	263 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms