RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 P2RY8Q86VZ1 359 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM126BQ8IUX1 230 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF740Q8NDX6 193 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 OR10H5Q8NGA6 315 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 PROKR1Q8TCW9 393 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 THAP3Q8WTV1 239 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 SNX33Q8WV41 574 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 STON2Q8WXE9 905 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 HSPA12BQ96MM6 686 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 MUS81Q96NY9 551 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 MCHR1Q99705 422 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 OR51I1Q9H343 314 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TM9SF3Q9HD45 589 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM184CQ9NVA4 438 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 SARDHQ9UL12 918 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 CLEC4AQ9UMR7 237 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 C9J4A7 227 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 K7ESM1 405 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TOR1BO14657 336 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TNFRSF1BP20333 461 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TMED10P49755 219 aaKnown RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 NRG3P56975 720 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 SHC2P98077 582 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 KCNC4Q03721 635 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 ST3GAL3Q11203 375 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 FADDQ13158 208 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 KRR1Q13601 381 aaKnown RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 RCAN2Q14206 197 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 CCSMST1Q4G0I0 132 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 FAM109BQ6ICB4 259 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 HACD2Q6Y1H2 254 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TMPRSS11AQ6ZMR5 421 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 ADIPOR2Q86V24 386 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 CARM1Q86X55 608 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 NAGSQ8N159 534 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 DTWD1Q8N5C7 304 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 CIDECQ96AQ7 238 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TAPBPLQ9BX59 468 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 MKKSQ9NPJ1 570 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TM7SF3Q9NS93 570 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 KLHL42Q9P2K6 505 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 THAP10Q9P2Z0 257 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 MKLN1Q9UL63 735 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 SHROOM3Q8TF72 1996 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 SPTA1P02549 2419 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PRSS38A1L453 326 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 UBFD1O14562 309 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TLX2O43763 284 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 AIREO43918 545 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MPZL2O60487 215 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HSD17B1P14061 328 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 IMPA1P29218 277 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 NADK2Q4G0N4 442 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM35AQ53FP2 167 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SLC29A4Q7RTT9 530 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEFF1Q8IYR6 380 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 IZUMO1Q8IYV9 350 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF433Q8N7K0 673 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 UXS1Q8NBZ7 420 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ENKURQ8TC29 256 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 RFKQ969G6 155 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DNAJA3Q96EY1 480 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MYADMQ96S97 322 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CDADC1Q9BWV3 514 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 VN1R3Q9BXE9 311 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PRRG4Q9BZD6 226 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 POLR2J2Q9GZM3 115 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TBC1D17Q9HA65 648 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DMRT3Q9NQL9 472 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SLC35C2Q9NQQ7 365 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 NECTIN3Q9NQS3 549 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MARK1Q9P0L2 795 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 POFUT2Q9Y2G5 429 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HCN4Q9Y3Q4 1203 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM202A6NGA9 273 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 UGDHO60701 494 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 KCNJ13O60928 360 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 RNH1P13489 461 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CERS1P27544 350 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DECR1Q16698 335 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CTC1Q2NKJ3 1217 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 COQ5Q5HYK3 327 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 C1orf189Q5VU69 101 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HSDL2Q6YN16 418 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 Q6ZSR9 355 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MAVSQ7Z434 540 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 LAPTM4BQ86VI4 370 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 POC5Q8NA72 575 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 OR52E4Q8NGH9 312 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ZFYVE21Q9BQ24 234 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DOHHQ9BU89 302 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 UCK2Q9BZX2 261 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM168Q9H0V1 697 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms