RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ACKR4Q9NPB9 350 aa14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 FBXO6Q9NRD1 293 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 QPCTLQ9NXS2 382 aa14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ADAMTS6Q9UKP5 1117 aa14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SOX13Q9UN79 622 aa14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 PACSIN2Q9UNF0 486 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SH3D21A4FU49 640 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 IPO7O95373 1038 aaKnown RBP14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RFPL3SP0C7P2 107 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CTSSP25774 331 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CPA2P48052 419 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RGS4P49798 205 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RNF4P78317 190 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 BTN3A2P78410 334 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SP140Q13342 867 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CTBP1Q13363 440 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TOR1AIP1Q5JTV8 583 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 HMBOX1Q6NT76 420 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CLNKQ7Z7G1 428 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 MORN4Q8NDC4 146 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 OR14A16Q8NHC5 309 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RBM24Q9BX46 236 aaKnown RBP14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 KLHL31Q9H511 634 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 NDRG3Q9UGV2 375 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 MED16Q9Y2X0 877 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 COMMD10Q9Y6G5 202 aa14.17□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 HIVEP2P31629 2446 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 KDM4EB2RXH2 506 aaPredicted RBP14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TGFBR3LH3BV60 316 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ERN1O75460 977 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 IFNA2P01563 188 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SMIM10L1P0DMW3 83 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TNNI3P19429 210 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 FPR1P21462 350 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RAB38P57729 211 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 DUSP8Q13202 625 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SNX1Q13596 522 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RBBP5Q15291 538 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 PRAMEF20Q5VT98 475 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 NSUN5P2Q63ZY6 315 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 DUPD1Q68J44 220 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CASC4Q6P4E1 433 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 PODNL1Q6PEZ8 512 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ZNF595Q8IYB9 648 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 MYO1HQ8N1T3 1032 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 LRRC57Q8N9N7 239 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 FAM47BQ8NA70 645 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SLC5A11Q8WWX8 675 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SMIM10Q96HG1 83 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TRIB1Q96RU8 372 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SPNS1Q9H2V7 528 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 COPS7AQ9UBW8 275 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TRMT6Q9UJA5 497 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CAMK2AQ9UQM7 478 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 MAD1L1Q9Y6D9 718 aa14.16□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ARHGAP21Q5T5U3 1957 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 A0A088AWK7 358 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 GRID2IPA4D2P6 1211 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CNOT4O95628 575 aaKnown RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SERPINA6P08185 405 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 F7P08709 466 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ZSCAN5DPP0CG00 497 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ZNF10P21506 573 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 GDF1P27539 372 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 STXBP1P61764 594 aaKnown RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ASPHQ12797 758 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 STX4Q12846 297 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 UGT3A1Q6NUS8 523 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 LUZP2Q86TE4 346 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 DENND6AQ8IWF6 608 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SYCE1Q8N0S2 351 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 LRRC25Q8N386 305 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RASGEF1CQ8N431 466 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ANKRD53Q8N9V6 530 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 SLC22A8Q8TCC7 542 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 EEF1AKMT1Q8WVE0 214 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 C1orf54Q8WWF1 131 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TMEM158Q8WZ71 300 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TSNARE1Q96NA8 513 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 RUNDC3BQ96NL0 473 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TIMP4Q99727 224 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 AIF1LQ9BQI0 150 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 NPLQ9BXD5 320 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 HOMER3Q9NSC5 361 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 ARL15Q9NXU5 204 aa14.15□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 A0A0G2JN53 185 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 MYOCOSA0A1B0GUC4 107 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 MBD3L4A6NDZ8 208 aaPredicted RBP14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 MBD3L5A6NJ08 208 aaPredicted RBP14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 C4orf51C9J302 202 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 B3GALT2O43825 422 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 ZNF354AO60765 605 aaPredicted RBP14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 TRAPPC6AO75865 159 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 IL18BPO95998 194 aa14.14□□□□□ -0.15
NEDD8-MDP1-204ENST00000605847 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms