RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TMEM132CQ8N3T6 1108 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF321PQ8N8H1 164 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TC2NQ8N9U0 490 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ANKRD53Q8N9V6 530 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TMEM52Q8NDY8 209 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 NEIL3Q8TAT5 605 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 HSPBAP1Q96EW2 488 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PERPQ96FX8 193 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TSNARE1Q96NA8 513 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 OR4K3Q96R72 315 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 OR8D2Q9GZM6 311 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 LACRTQ9GZZ8 138 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PARVBQ9HBI1 364 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 AMFRQ9UKV5 643 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 BOKQ9UMX3 212 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CLCA3PQ9Y6N3 262 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 A0A0G2JN53 185 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 AHRRA9YTQ3 701 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 EIF3FO00303 357 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CLDN4O14493 209 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CRLF1O75462 422 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SMIM10L1P0DMW3 83 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 BMP7P18075 431 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PAMP19021 973 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SAT1P21673 171 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 AHRP35869 848 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SLC1A2P43004 574 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RNF4P78317 190 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 REEP5Q00765 189 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RUNX2Q13950 521 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CSHL1Q14406 222 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CASC4Q6P4E1 433 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PHC2Q8IXK0 858 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PALM2Q8IXS6 379 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LRRC25Q8N386 305 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 TRPV3Q8NET8 790 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 EEF1AKMT1Q8WVE0 214 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SLC5A11Q8WWX8 675 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SMPDL3BQ92485 455 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 DAZLQ92904 295 aaKnown RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PIGTQ969N2 578 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 NEIL2Q969S2 332 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SMIM10Q96HG1 83 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 JSRP1Q96MG2 331 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 DACH2Q96NX9 599 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PIP5K1AQ99755 562 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 FRMD8P1Q9BZ68 369 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 AICDAQ9GZX7 198 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 EPB41L4BQ9H329 900 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ACKR4Q9NPB9 350 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ARL15Q9NXU5 204 aa10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 TRMT6Q9UJA5 497 aaKnown RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MRPS33Q9Y291 106 aaKnown RBP10.83□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SH3D21A4FU49 640 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 BTNL10A8MVZ5 291 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RAB38P57729 211 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 THOC5Q13769 683 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RBBP5Q15291 538 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 NSUN5P2Q63ZY6 315 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LRRC8EQ6NSJ5 796 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ZNF595Q8IYB9 648 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MYO1HQ8N1T3 1032 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 ZNF454Q8N9F8 522 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MORN4Q8NDC4 146 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 OR5L2Q8NGL0 311 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 OR56A3Q8NH54 315 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 OR14A16Q8NHC5 309 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PTPMT1Q8WUK0 201 aaPredicted RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 FAR2Q96K12 515 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 HIST1H2AHQ96KK5 128 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CSF3RQ99062 836 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CCL19Q99731 98 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 HIST1H2AJQ99878 128 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 H2AFJQ9BTM1 129 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 TSGA10Q9BZW7 698 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 HOMER3Q9NSC5 361 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 GALNT8Q9NY28 637 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 JKAMPQ9P055 326 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 EIF3LQ9Y262 564 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 REXO2Q9Y3B8 237 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 RTTNQ86VV8 2226 aa10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
PDLIM1P1-201ENST00000604187 PABPN1LA6NDY0 278 aaKnown RBP10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 CASKO14936 926 aa10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 LRATO95237 230 aa10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 IPO7O95373 1038 aaKnown RBP10.81□□□□□ -0.68
PDLIM1P1-201ENST00000604187 SERPINA6P08185 405 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms