RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 MAGED4Q96JG8 741 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 GPR78Q96P69 363 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 ACTR8Q9H981 624 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 DMRT3Q9NQL9 472 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 KCMF1Q9P0J7 381 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CPSF2Q9P2I0 782 aaKnown RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 SUCOQ9UBS9 1254 aaKnown RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CLCA3PQ9Y6N3 262 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 SPACA6W5XKT8 324 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CCDC189A1A4V9 331 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 CCL21O00585 134 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 LDB3O75112 727 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ZFAND5O76080 213 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 SCELO95171 688 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 SIX3O95343 332 aaPredicted RBP15.25■□□□□ 0.03
TUBE1-206ENST00000603722 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ZNF24P17028 368 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ECHS1P30084 290 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 GPR143P51810 404 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 RAP1GDS1P52306 607 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ID2Q02363 134 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.03
TUBE1-206ENST00000603722 AP5B1Q2VPB7 878 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 TECRLQ5HYJ1 363 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 C16orf47Q6ZP98 133 aaPredicted RBP15.25■□□□□ 0.03
TUBE1-206ENST00000603722 SIAH3Q8IW03 269 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 CYP4Z2PQ8N1L4 340 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 PLD6Q8N2A8 252 aaKnown RBP15.25■□□□□ 0.03
TUBE1-206ENST00000603722 TMEM132CQ8N3T6 1108 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 TMEM156Q8N614 296 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 SLC44A1Q8WWI5 657 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 CCDC120Q96HB5 630 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 PAFAH2Q99487 392 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 MTERF1Q99551 399 aaKnown RBP15.25■□□□□ 0.03
TUBE1-206ENST00000603722 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ALOXE3Q9BYJ1 711 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 ZNF358Q9NW07 568 aa15.25■□□□□ 0.03
TUBE1-206ENST00000603722 SCN3AQ9NY46 2000 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 KLK8O60259 260 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 TNNI3P19429 210 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 CPN2P22792 545 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 MEOX1P50221 254 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 CASP6P55212 293 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 RPS13P62277 151 aaKnown RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 HSF1Q00613 529 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 GTF2H2Q13888 395 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 PCBP2Q15366 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 C3AR1Q16581 482 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 DEPDC1Q5TB30 811 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 LIPJQ5W064 366 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 OR4C11Q6IEV9 310 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 GTF2H2CQ6P1K8 395 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 TAOK1Q7L7X3 1001 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 GOLGA7Q7Z5G4 137 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 ZNF321PQ8N8H1 164 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 PTGR2Q8N8N7 351 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 OR14A16Q8NHC5 309 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 UHMK1Q8TAS1 419 aaKnown RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 PTPMT1Q8WUK0 201 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 DAZLQ92904 295 aaKnown RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 CENPKQ9BS16 269 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 OR8D2Q9GZM6 311 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 LIN28AQ9H9Z2 209 aaKnown RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 VTI1BQ9UEU0 232 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 ADGRE2Q9UHX3 823 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 KLF13Q9Y2Y9 288 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 PCDHGA11Q9Y5H2 935 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 TNPO3Q9Y5L0 923 aaKnown RBP15.24■□□□□ 0.03
TUBE1-206ENST00000603722 IKBKGQ9Y6K9 419 aa15.24■□□□□ 0.03
TUBE1-206ENST00000603722 UNC79Q9P2D8 2635 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 C17orf105B2RV13 164 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 PLPP1O14494 284 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 ZNHIT1O43257 154 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 FGF17O60258 216 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 OR2J2O76002 312 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 ARL1P40616 181 aaPredicted RBP15.23■□□□□ 0.03
TUBE1-206ENST00000603722 RFC3P40938 356 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 PIK3CBP42338 1070 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 MAGEA12P43365 314 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 PIK3CGP48736 1102 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 SSR4P51571 173 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 PHEXP78562 749 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 SLAMF1Q13291 335 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 SERTAD2Q14140 314 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
TUBE1-206ENST00000603722 KRTCAP3Q53RY4 240 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 RNFT1Q5M7Z0 435 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 HSDL2Q6YN16 418 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 MDGA2Q7Z553 956 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 SULF2Q8IWU5 870 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 MORN4Q8NDC4 146 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 SLC2A12Q8TD20 617 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 ISL2Q96A47 359 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 RGMAQ96B86 450 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 IPPKQ9H8X2 491 aa15.23■□□□□ 0.03
TUBE1-206ENST00000603722 XPR1Q9UBH6 696 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms