RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CACYBPQ9HB71 228 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZBTB20Q9HC78 741 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SMURF1Q9HCE7 757 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ACOT13Q9NPJ3 140 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 PRMT7Q9NVM4 692 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZDHHC8Q9ULC8 765 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TBX20Q9UMR3 447 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MOKQ9UQ07 419 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF541Q9H0D2 1346 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 A0A1B0GVC2 190 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 C7orf66A4D0T2 115 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NPIPA2E9PIF3 369 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TEX46H3BTG2 121 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LGALS8O00214 317 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 PRSS23O95084 383 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LDLRP01130 860 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 FHP07954 510 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 C6P13671 934 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LAG3P18627 525 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 RFX1P22670 979 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 PSMB9P28065 219 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 GRIA4P48058 902 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NAGLUP54802 743 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 GABPAQ06546 454 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF79Q15937 498 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF630Q2M218 657 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 VPS26BQ4G0F5 336 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ATAT1Q5SQI0 421 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LCN1P1Q5VSP4 162 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LAIR2Q6ISS4 152 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MED27Q6P2C8 311 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 IGF2-ASQ6U949 168 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 RFX6Q8HWS3 928 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 FAM160A2Q8N612 972 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 POGLUT1Q8NBL1 392 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 C19orf18Q8NEA5 215 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZDHHC1Q8WTX9 485 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TRAPPC12Q8WVT3 735 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SELENOMQ8WWX9 145 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TM9SF4Q92544 642 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 OSTF1Q92882 214 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 COQ8BQ96D53 544 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MESP1Q9BRJ9 268 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NDUFAF3Q9BU61 184 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 RBCK1Q9BYM8 510 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SIX2Q9NPC8 291 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TLR8Q9NR97 1041 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 DHCR7Q9UBM7 475 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 DRG1Q9Y295 367 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 YLPM1P49750 1951 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TBC1D3KA0A087X1G2 549 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 KCNU1A8MYU2 1149 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 DFFAO00273 331 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CSTAP01040 98 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HIST1H2AGP0C0S8 130 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HSD17B1P14061 328 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HIST1H2ADP20671 130 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 AGAP20933 346 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CDKN2CP42773 168 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MAGEA2P43356 314 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SORDQ00796 357 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TNFRSF17Q02223 184 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CD47Q08722 323 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PNLIPRP3Q17RR3 467 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 GLYR1Q49A26 553 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HIST2H2AA3Q6FI13 130 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 LPCAT3Q6P1A2 487 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FAM198BQ6UWH4 519 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TMPRSS11AQ6ZMR5 421 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 LDLRAD3Q86YD5 345 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PDZD9Q8IXQ8 264 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FAM185AQ8N0U4 392 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SLC44A3Q8N4M1 653 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RNF148Q8N7C7 305 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF454Q8N9F8 522 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 FBXO36Q8NEA4 188 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RXFP4Q8TDU9 374 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 TM4SF18Q96CE8 201 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HIST1H2AHQ96KK5 128 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MCCC1Q96RQ3 725 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HIST1H2AJQ99878 128 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 HTATIP2Q9BUP3 242 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PCDHAC1Q9H158 963 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 MTIF3Q9H2K0 278 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RIBC2Q9H4K1 309 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 CAPN10Q9HC96 672 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
COMMD3-215ENST00000602574 RNF6Q9Y252 685 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 NUP98P52948 1817 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SCN7AQ01118 1682 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 SERTM2A0A1B0GWG4 89 aa8.5□□□□□ -1.05
COMMD3-215ENST00000602574 PRORSD1PA6NEY8 169 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms