RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PAPD4Q6PIY7 484 aaKnown RBP15.17■□□□□ 0.02
LSM4-206ENST00000600289 Q6ZS92 163 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 MILR1Q7Z6M3 343 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 TRABD2AQ86V40 505 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 RNF175Q8N4F7 328 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 ARMC2Q8NEN0 867 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 BRIX1Q8TDN6 353 aaKnown RBP15.17■□□□□ 0.02
LSM4-206ENST00000600289 EPS8L2Q9H6S3 715 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 NECTIN3Q9NQS3 549 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 ZNF225Q9UK10 706 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 SPACA6W5XKT8 324 aa15.17■□□□□ 0.02
LSM4-206ENST00000600289 SETD2Q9BYW2 2564 aaPredicted RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 IGHV3-20A0A0C4DH32 117 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 A0A1B0GTL3 188 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 SAGE2PA6NJ88 616 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 FOXO6A8MYZ6 492 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 RTCAO00442 366 aaKnown RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 SUPT7LO94864 414 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ETHE1O95571 254 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 MYL2P10916 166 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ITGAMP11215 1152 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 MAOAP21397 527 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 CD97P48960 835 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 RAP1GDS1P52306 607 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 HNRNPFP52597 415 aaKnown RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 CDH13P55290 713 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 SLC26A5P58743 744 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 DNAJB13P59910 316 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ZNF33BQ06732 778 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 IFFO1Q0D2I5 559 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 LCP2Q13094 533 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 IFT88Q13099 833 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 NADK2Q4G0N4 442 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 RPS27LQ71UM5 84 aaKnown RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 TICAM1Q8IUC6 712 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ZADH2Q8N4Q0 377 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 TMEM52Q8NDY8 209 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 TRPC4APQ8TEL6 797 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 APOPT1Q96IL0 206 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 CSF3RQ99062 836 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 SLC29A3Q9BZD2 475 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 RNF32Q9H0A6 362 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 DDX31Q9H8H2 851 aaKnown RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 BRF2Q9HAW0 419 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ZBTB20Q9HC78 741 aaPredicted RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 PRTFDC1Q9NRG1 225 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 MS4A12Q9NXJ0 267 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 PHF11Q9UIL8 331 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 MID2Q9UJV3 735 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 SNX6Q9UNH7 406 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 PPIEQ9UNP9 301 aaKnown RBP15.16■□□□□ 0.02
LSM4-206ENST00000600289 B3GNT3Q9Y2A9 372 aa15.16■□□□□ 0.02
LSM4-206ENST00000600289 ADGRG4Q8IZF6 3080 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 H3BQF6 201 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 SAP18O00422 153 aaKnown RBP15.15■□□□□ 0.02
LSM4-206ENST00000600289 PPP6CO00743 305 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 CDK2AP1O14519 115 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 CTNSO60931 367 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 CELA2AP08217 269 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 RNF224P0DH78 156 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 BSGP35613 385 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 ARL1P40616 181 aaPredicted RBP15.15■□□□□ 0.02
LSM4-206ENST00000600289 PKNOX1P55347 436 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 ACTN3Q08043 901 aaPredicted RBP15.15■□□□□ 0.02
LSM4-206ENST00000600289 BTBD16Q32M84 506 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 ZNF787Q6DD87 383 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 MRM1Q6IN84 353 aaKnown RBP15.15■□□□□ 0.02
LSM4-206ENST00000600289 GPRIN3Q6ZVF9 776 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 NUDT13Q86X67 352 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 LGI4Q8N135 537 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 C4orf33Q8N1A6 199 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 BANPQ8N9N5 519 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 FAM47BQ8NA70 645 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 Q8NA96 180 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 ELP5Q8TE02 316 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 MAPKAP1Q9BPZ7 522 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 GSTO2Q9H4Y5 243 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 ELOVL6Q9H5J4 265 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 OXSMQ9NWU1 459 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 LYARQ9NX58 379 aaKnown RBP15.15■□□□□ 0.02
LSM4-206ENST00000600289 ADAM29Q9UKF5 820 aa15.15■□□□□ 0.02
LSM4-206ENST00000600289 PRRC2CQ9Y520 2896 aaKnown RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 A0A0A6YYD5 115 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 TLDC2A0PJX2 215 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 TGFBR3LH3BV60 316 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 SH3BGRLO75368 114 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 OR4F21O95013 312 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 ENO1P06733 434 aaKnown RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 HSD3B1P14060 373 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 HSD3B2P26439 372 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 NEK2P51955 445 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 IGLV3-21P80748 117 aaPredicted RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 TNFRSF17Q02223 184 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 SLAMF1Q13291 335 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 TTC19Q6DKK2 380 aaPredicted RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 NFAM1Q8NET5 270 aaPredicted RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 SORBS1Q9BX66 1292 aaKnown RBP15.14■□□□□ 0.01
LSM4-206ENST00000600289 ADAP2Q9NPF8 381 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 TEKT2Q9UIF3 430 aa15.14■□□□□ 0.01
LSM4-206ENST00000600289 NF1P21359 2839 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms