RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 HMOX2P30519 316 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 TSFMP43897 325 aaKnown RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 ARFIP1P53367 373 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 HSD17B7P56937 341 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 ID2Q02363 134 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 KLRB1Q12918 225 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 SLC13A2Q13183 592 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 CFAP157Q5JU67 520 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 C10orf62Q5T681 223 aaPredicted RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 AGAP7PQ5VUJ5 663 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 IRAK1BP1Q5VVH5 260 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 B3GNTL1Q67FW5 361 aaPredicted RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 C18orf63Q68DL7 685 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 PLAG1Q6DJT9 500 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 SCIMPQ6UWF3 145 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 LRIG3Q6UXM1 1119 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 PRICKLE2Q7Z3G6 844 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 EXOC3L1Q86VI1 746 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 TEX19Q8NA77 164 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 AGAP4Q96P64 663 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 LPAR4Q99677 370 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 SLC29A3Q9BZD2 475 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 DDX31Q9H8H2 851 aaKnown RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 PNO1Q9NRX1 252 aaKnown RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 C5AR2Q9P296 337 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 MRPS33Q9Y291 106 aaKnown RBP14.26□□□□□ -0.13
LIG1-219ENST00000600055 STK38LQ9Y2H1 464 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 ATG4BQ9Y4P1 393 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 ASB4Q9Y574 426 aa14.26□□□□□ -0.13
LIG1-219ENST00000600055 WASHC1A8K0Z3 465 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 DPM1O60762 260 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 TRIM13O60858 407 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 CTNSO60931 367 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 LDB3O75112 727 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 KRT6AP02538 564 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 KRT6BP04259 564 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 ALPPP05187 535 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 ENO1P06733 434 aaKnown RBP14.25□□□□□ -0.13
LIG1-219ENST00000600055 KLK1P06870 262 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 FAM58BPP0C7Q3 252 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 ICAM2P13598 275 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 KRT6CP48668 564 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 SLC26A5P58743 744 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 RCN2Q14257 317 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 TNFAIP8L3Q5GJ75 292 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 CYP20A1Q6UW02 462 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 LINC00696Q6ZRV3 163 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 RIPOR1Q6ZS17 1223 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 GPR180Q86V85 440 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 NUDT13Q86X67 352 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 OR4N5Q8IXE1 308 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 METTL4Q8N3J2 472 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 UCN3Q969E3 161 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 ANKRD9Q96BM1 317 aaPredicted RBP14.25□□□□□ -0.13
LIG1-219ENST00000600055 BRF2Q9HAW0 419 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 SENP1Q9P0U3 644 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 LUZP4Q9P127 313 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 CSAG2Q9Y5P2 127 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 SPACA6W5XKT8 324 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 SCN2AQ99250 2005 aa14.25□□□□□ -0.13
LIG1-219ENST00000600055 A0A1W2PR48 441 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 PROM1O43490 865 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 SLC28A2O43868 658 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 KLHL41O60662 606 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ULK1O75385 1050 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 TPP2P29144 1249 aaPredicted RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 SERPINB3P29508 390 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 SOX11P35716 441 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 NAA20P61599 178 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 HMGCS1Q01581 520 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 TNFRSF17Q02223 184 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 GALNT1Q10472 559 aaPredicted RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 TBL3Q12788 808 aaKnown RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 EXT1Q16394 746 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 FCRLBQ6BAA4 426 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ISLR2Q6UXK2 745 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ZCCHC23Q6ZST2 131 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 COMMD6Q7Z4G1 85 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ZNF605Q86T29 641 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 KIF2BQ8N4N8 673 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 NFAM1Q8NET5 270 aaPredicted RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 M1APQ8TC57 530 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ALOXE3Q9BYJ1 711 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ACPTQ9BZG2 426 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ARGLU1Q9NWB6 273 aaPredicted RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 LYARQ9NX58 379 aaKnown RBP14.24□□□□□ -0.13
LIG1-219ENST00000600055 AHSPQ9NZD4 102 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 PHF11Q9UIL8 331 aa14.24□□□□□ -0.13
LIG1-219ENST00000600055 ARHGAP10A1A4S6 786 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 SAGE2PA6NJ88 616 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 GLOD5A6NK44 160 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 A8MUI8 341 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 FGF17O60258 216 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 MYO1DO94832 1006 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 AIFM1O95831 613 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 ETV4P43268 484 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 ST13P50502 369 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms