RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR5P2Q8WZ92 322 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 TPD52L3Q96J77 140 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 OR2A14Q96R47 310 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 TWSG1Q9GZX9 223 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PNPLA3Q9NST1 481 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 KNL1Q8NG31 2342 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 SPTY2D1-AS1A0A0U1RR47 76 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 NOBOXO60393 691 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 FKBP9O95302 570 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 THEGLP0DJG4 465 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 UQCRC2P22695 453 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 PPP2R2BQ00005 443 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 EEF1A2Q05639 463 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 HSPB3Q12988 150 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 FADDQ13158 208 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 FKBP9P1Q75LS8 142 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 DGLUCYQ7Z3D6 616 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 VN1R4Q7Z5H5 301 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OFCC1Q8IZS5 231 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 SVOPLQ8N434 492 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OR5K1Q8NHB7 308 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 NFKBIDQ8NI38 313 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OSBPL10Q9BXB5 764 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 SIRT3Q9NTG7 399 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 GON4LQ3T8J9 2241 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 GLOD5A6NK44 160 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 H3BNH8 94 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 TOR1BO14657 336 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 B4GALT2O60909 372 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 TFAP2AP05549 437 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 HOXB6P17509 224 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 POLR2CP19387 275 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 HIST1H1TP22492 207 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 ATP5A1P25705 553 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 GSTM2P28161 218 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 CDK9P50750 372 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 RAB8AP61006 207 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 TRA2BP62995 288 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 SLAMF1Q13291 335 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 SCARB2Q14108 478 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 TRIM40Q6P9F5 258 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 USP51Q70EK9 711 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 ACOT4Q8N9L9 421 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OR2L5Q8NG80 312 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OR10G6Q8NH81 332 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 BARD1Q99728 777 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 TMEM38AQ9H6F2 299 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 GPR27Q9NS67 375 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 ASB4Q9Y574 426 aa16.17■□□□□ 0.18
SHKBP1-216ENST00000598201 OR6C74A6NCV1 312 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 ZW10O43264 779 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 E2F6O75461 281 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 H6PDO95479 791 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 KRT75O95678 551 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 OPN1SWP03999 348 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 FABP3P05413 133 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 THRBP10828 461 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 ATP6V1B1P15313 513 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 UGT2B7P16662 529 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 MAGP20916 626 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 GSTM5P46439 218 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 PRIM2P49643 509 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 CLCN2P51788 898 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 RPS26P62854 115 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 KCNJ10P78508 379 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 APOFQ13790 326 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 KIR2DS3Q14952 304 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 TEAD4Q15561 434 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 IQCCQ4KMZ1 466 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 MRM1Q6IN84 353 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 FBXO42Q6P3S6 717 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 TRIM48Q8IWZ4 208 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 TBC1D19Q8N5T2 526 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 DTWD2Q8NBA8 298 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 KCT2Q8NC54 265 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 SDCCAG3Q96C92 435 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 ZNF764Q96H86 408 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 C7orf34Q96L11 122 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 KCNC2Q96PR1 638 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 NLNQ9BYT8 704 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 TAS2R7Q9NYW3 318 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 ATG4BQ9Y4P1 393 aa16.16■□□□□ 0.18
SHKBP1-216ENST00000598201 IGHV1OR15-9A0A0B4J2B8 117 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 A0A1W2PPC4 97 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 A0A1W2PR48 441 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SEC24DO94855 1032 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 HPRP00739 348 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CERS1P27544 350 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 PXNP49023 591 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 MYBPC3Q14896 1274 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SLC9A5Q14940 896 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 LAPTM4AQ15012 233 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 LIN52Q52LA3 116 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SAXO2Q658L1 398 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 OR2T5Q6IEZ7 315 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CEP68Q76N32 757 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 C1orf210Q8IVY1 113 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms