RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 KRT12Q99456 494 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 TREX2Q9BQ50 279 aaPredicted RBP9.77□□□□□ -0.85
LSM4-205ENST00000597776 CAPS2Q9BXY5 557 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 ALOXE3Q9BYJ1 711 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 OR8D2Q9GZM6 311 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 PITHD1Q9GZP4 211 aaPredicted RBP9.77□□□□□ -0.85
LSM4-205ENST00000597776 TP63Q9H3D4 680 aaPredicted RBP9.77□□□□□ -0.85
LSM4-205ENST00000597776 EHD1Q9H4M9 534 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 CNOT10Q9H9A5 744 aaKnown RBP9.77□□□□□ -0.85
LSM4-205ENST00000597776 MCCC2Q9HCC0 563 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 PRDM7Q9NQW5 492 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 NSMCE4AQ9NXX6 385 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 CD274Q9NZQ7 290 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 RNF6Q9Y252 685 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 LIPGQ9Y5X9 500 aa9.77□□□□□ -0.85
LSM4-205ENST00000597776 C17orf105B2RV13 164 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 NPIPA2E9PIF3 369 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 NPIPA3F8WFD2 350 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 CCNT2O60583 730 aaKnown RBP9.76□□□□□ -0.85
LSM4-205ENST00000597776 ZNF354AO60765 605 aaPredicted RBP9.76□□□□□ -0.85
LSM4-205ENST00000597776 STK16O75716 305 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 CD1DP15813 335 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 TNNI3P19429 210 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 CHRNB4P30926 498 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 MSH2P43246 934 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 KCNC1P48547 511 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 NUP107P57740 925 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 GNG11P61952 73 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 TFF3Q07654 80 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PMPCAQ10713 525 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 STX4Q12846 297 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 EFTUD2Q15029 972 aaKnown RBP eCLIP9.76□□□□□ -0.85
LSM4-205ENST00000597776 TMEM211Q6ICI0 200 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 SULT1C3Q6IMI6 304 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 GPALPP1Q8IXQ4 340 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 MORN4Q8NDC4 146 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 OR14A16Q8NHC5 309 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 LILRB4Q8NHJ6 448 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 SLC2A12Q8TD20 617 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PYROXD1Q8WU10 500 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 ASB5Q8WWX0 329 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 RND1Q92730 232 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 DAZLQ92904 295 aaKnown RBP9.76□□□□□ -0.85
LSM4-205ENST00000597776 WDR34Q96EX3 536 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PTCD3Q96EY7 689 aaKnown RBP9.76□□□□□ -0.85
LSM4-205ENST00000597776 TSPAN17Q96FV3 270 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 KCNC2Q96PR1 638 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 GPR22Q99680 433 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 MAPKAP1Q9BPZ7 522 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 MS4A8Q9BY19 250 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 TTTY12Q9BZ98 90 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 ZDHHC11Q9H8X9 412 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PNPLA3Q9NST1 481 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 TNFRSF10DQ9UBN6 386 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 VTI1BQ9UEU0 232 aa9.76□□□□□ -0.85
LSM4-205ENST00000597776 PTBP2Q9UKA9 531 aaKnown RBP9.76□□□□□ -0.85
LSM4-205ENST00000597776 TCRBV9S1A1TA0A576 114 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 ACOT7O00154 380 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 FANCGO15287 622 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 TOXO94900 526 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 GLSO94925 669 aaPredicted RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 ETHE1O95571 254 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 TGFB1P01137 390 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 CELA3AP09093 270 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 CCL3P10147 92 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 PCNAP12004 261 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 STMN1P16949 149 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 IGFBP2P18065 325 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 CAPN3P20807 821 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 HPDP32754 393 aaPredicted RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 MAGEA5P43359 124 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 DNASE1L1P49184 302 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 RNF4P78317 190 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 IRF8Q02556 426 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 TGM3Q08188 693 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 CHIT1Q13231 466 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 RCN2Q14257 317 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 TESK1Q15569 626 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 PAGE2BQ5JRK9 111 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 RTL4Q6ZR62 310 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 GK5Q6ZS86 529 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 SLC22A16Q86VW1 577 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 OR4N5Q8IXE1 308 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 RNF175Q8N4F7 328 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 TMEM251Q8N6I4 163 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 ACOT4Q8N9L9 421 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 PDPRQ8NCN5 879 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 OR5M3Q8NGP4 307 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 DOK4Q8TEW6 326 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 KIAA1191Q96A73 305 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 ANKRD9Q96BM1 317 aaPredicted RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 SMC6Q96SB8 1091 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 RBBP8Q99708 897 aa9.75□□□□□ -0.85
LSM4-205ENST00000597776 NAPGQ99747 312 aaPredicted RBP9.75□□□□□ -0.85
LSM4-205ENST00000597776 CPNE1Q99829 537 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms