RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 MAPKAPK3Q16644 382 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 C18orf63Q68DL7 685 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 SLC2A7Q6PXP3 512 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 BPHLQ86WA6 291 aaPredicted RBP13.85□□□□□ -0.19
VRK3-212ENST00000596814 PPP1R3BQ86XI6 285 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 BMPERQ8N8U9 685 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 RBM15BQ8NDT2 890 aaKnown RBP13.85□□□□□ -0.19
VRK3-212ENST00000596814 FBXO27Q8NI29 283 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 CSF3RQ99062 836 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 SLC7A5P2Q9GIP4 190 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 APMAPQ9HDC9 416 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 FAM120CQ9NX05 1096 aaKnown RBP13.85□□□□□ -0.19
VRK3-212ENST00000596814 DHCR7Q9UBM7 475 aaKnown RBP13.85□□□□□ -0.19
VRK3-212ENST00000596814 NDOR1Q9UHB4 597 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 CLCA2Q9UQC9 943 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 SPEGQ15772 3267 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 KIF26BQ2KJY2 2108 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 A0A1B0GX78 115 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 DNAJB6O75190 326 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 CSO75390 466 aaKnown RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 SCRG1O75711 98 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 MT-CO3P00414 261 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 FGF5P12034 268 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 CSRP1P21291 193 aaKnown RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 ALAS2P22557 587 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 PTPN4P29074 926 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 TLX1P31314 330 aaPredicted RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 CLDN6P56747 220 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 RAB38P57729 211 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 SHC2P98077 582 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 ACTN3Q08043 901 aaPredicted RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 ISXQ2M1V0 245 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 PAGE3Q5JUK9 113 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 HES3Q5TGS1 186 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 ANXA8L1Q5VT79 327 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 KIAA2013Q8IYS2 634 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 DEPDC7Q96QD5 511 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 ACTR5Q9H9F9 607 aaPredicted RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 CLK4Q9HAZ1 481 aaKnown RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 HCN3Q9P1Z3 774 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 CDC14AQ9UNH5 594 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 LOXL2Q9Y4K0 774 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 SPAARA0A1B0GVQ0 90 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 GLOD5A6NK44 160 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 CHST10O43529 356 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 DKK1O94907 266 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 TIAF1O95411 115 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 KRT16P08779 473 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 CCL4P13236 92 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 RNH1P13489 461 aaKnown RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 ITGAXP20702 1163 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 WNT3P56703 355 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 MC2RQ01718 297 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 NFYCQ13952 458 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 C6orf10Q5SRN2 563 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 OR52E8Q6IFG1 317 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 RHBDD2Q6NTF9 364 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 PWWP2BQ6NUJ5 590 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 SLC48A1Q6P1K1 146 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 PRMT9Q6P2P2 845 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 SLCO6A1Q86UG4 719 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 ANKRD46Q86W74 232 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 DSELQ8IZU8 1212 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 DPP10Q8N608 796 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 NATD1Q8N6N6 113 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 VPS37AQ8NEZ2 397 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 ADAMTS18Q8TE60 1221 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 UCN3Q969E3 161 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 ROPN1LQ96C74 230 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 LIN37Q96GY3 246 aaPredicted RBP13.84□□□□□ -0.19
VRK3-212ENST00000596814 ITCHQ96J02 903 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 C1orf21Q9H246 121 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 LRMDAQ9H2I8 198 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 PRDM9Q9NQV7 894 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 NDE1Q9NXR1 346 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 TAS2R1Q9NYW7 299 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 UTS2RQ9UKP6 389 aa13.84□□□□□ -0.19
VRK3-212ENST00000596814 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.19
VRK3-212ENST00000596814 B4E171 279 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 RNASET2O00584 256 aaKnown RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 PGRMC2O15173 223 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 GYG2O15488 501 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 PDPK1O15530 556 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 GFRA3O60609 400 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 CPOXP36551 454 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 TSPAN7P41732 249 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 MAT1AQ00266 395 aaKnown RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 PLIN5Q00G26 463 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 PRSS53Q2L4Q9 553 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 MPEG1Q2M385 716 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms