RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 RELTQ969Z4 430 aa12.16□□□□□ -0.46
LIG1-212ENST00000596549 GPR137Q96N19 417 aa12.16□□□□□ -0.46
LIG1-212ENST00000596549 TBCDQ9BTW9 1192 aa12.16□□□□□ -0.46
LIG1-212ENST00000596549 DEFB126Q9BYW3 111 aa12.16□□□□□ -0.46
LIG1-212ENST00000596549 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
LIG1-212ENST00000596549 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
LIG1-212ENST00000596549 OR7A17O14581 309 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 FGF17O60258 216 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 CTNSO60931 367 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 PRKRAO75569 313 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 ITGA10O75578 1167 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 INHBAP08476 426 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 GCAP28676 217 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 SERPINB1P30740 379 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 DCTP40126 519 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 CA7P43166 264 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 CYB561P49447 251 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 HLCSP50747 726 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 HNRNPH2P55795 449 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 RPS13P62277 151 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 ID2Q02363 134 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 TGM3Q08188 693 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 GTF2H2Q13888 395 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 TMEM35AQ53FP2 167 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 GTF2H2CQ6P1K8 395 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 CEP128Q6ZU80 1094 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 MYLK4Q86YV6 388 aaPredicted RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 PTGR2Q8N8N7 351 aaPredicted RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 SRFBP1Q8NEF9 429 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 OR52B6Q8NGF0 335 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 WDR20Q8TBZ3 569 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 PTPMT1Q8WUK0 201 aaPredicted RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 ANKRD9Q96BM1 317 aaPredicted RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 CMTM7Q96FZ5 175 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 CDK15Q96Q40 435 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 MTERF1Q99551 399 aaKnown RBP12.15□□□□□ -0.46
LIG1-212ENST00000596549 ROGDIQ9GZN7 287 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 ACTR8Q9H981 624 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 ZBTB26Q9HCK0 441 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 SH3BGRL2Q9UJC5 107 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 FBXW2Q9UKT8 454 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 ANGPTL3Q9Y5C1 460 aa12.15□□□□□ -0.46
LIG1-212ENST00000596549 A0A1B0GUH1 482 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 POC1B-GALNT4F8VUJ3 575 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 H0YIV9 168 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 CDK2AP1O14519 115 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 FCHO1O14526 889 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 ZNHIT1O43257 154 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 UGDHO60701 494 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 SBK3P0C264 359 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 MYBL2P10244 700 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 PIK3CGP48736 1102 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 PER3P56645 1201 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 IGLV3-21P80748 117 aaPredicted RBP12.14□□□□□ -0.47
LIG1-212ENST00000596549 HSF1Q00613 529 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 TNFRSF17Q02223 184 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 ALDH6A1Q02252 535 aaKnown RBP12.14□□□□□ -0.47
LIG1-212ENST00000596549 TRAF3Q13114 568 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 MAPKAPK3Q16644 382 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 LIPJQ5W064 366 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 OR4C11Q6IEV9 310 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 KLC3Q6P597 504 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 MDGA2Q7Z553 956 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 CYP4Z2PQ8N1L4 340 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 HORMAD2Q8N7B1 307 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 SREK1Q8WXA9 508 aaKnown RBP12.14□□□□□ -0.47
LIG1-212ENST00000596549 CCDC120Q96HB5 630 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 NSUN5Q96P11 429 aaKnown RBP12.14□□□□□ -0.47
LIG1-212ENST00000596549 ALOXE3Q9BYJ1 711 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
LIG1-212ENST00000596549 VTI1BQ9UEU0 232 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 TINAGQ9UJW2 476 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 ZNF180Q9UJW8 692 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 RNF11Q9Y3C5 154 aa12.14□□□□□ -0.47
LIG1-212ENST00000596549 A0A0A6YYD5 115 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 A0A1B0GTL3 188 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 SYNDIG1LA6NDD5 238 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 NPIPA5E9PKD4 350 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 TMPRSS11DO60235 418 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
LIG1-212ENST00000596549 SLC19A2O60779 497 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 EEDO75530 441 aaKnown RBP12.13□□□□□ -0.47
LIG1-212ENST00000596549 IFNA16P05015 189 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 RPS17P08708 135 aaKnown RBP12.13□□□□□ -0.47
LIG1-212ENST00000596549 ZNF24P17028 368 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 CPN2P22792 545 aa12.13□□□□□ -0.47
LIG1-212ENST00000596549 MEOX1P50221 254 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms