RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FBXO36Q8NEA4 188 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF592Q92610 1267 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 YIPF4Q9BSR8 244 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 BDH2Q9BUT1 245 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 RHBGQ9H310 441 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 EPB41L4BQ9H329 900 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 EXO5Q9H790 373 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 SEMA4BQ9NPR2 832 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC22A7Q9Y694 548 aa12.72□□□□□ -0.37
SHKBP1-208ENST00000595726 IGKV3D-11A0A0A0MRZ8 115 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF839A8K0R7 811 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 FAM47E-STBD1D6RA91 191 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 EIF3FO00303 357 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 DVL2O14641 736 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 SUSD5O60279 629 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 SMPD2O60906 423 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 CNR1P21554 472 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 JAK1P23458 1154 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 SOX3P41225 446 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 DNASE1L1P49184 302 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 CDKN2DP55273 166 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 FRG1Q14331 258 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 CYHR1Q6ZMK1 362 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF572Q7Z3I7 529 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 PIWIL4Q7Z3Z4 852 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 YTHDF3Q7Z739 585 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 AFAP1L2Q8N4X5 818 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 BBOF1Q8ND07 529 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ASB11Q8WXH4 323 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 LRRC46Q96FV0 321 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 TAS2R13Q9NYV9 303 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 WHRNQ9P202 907 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ZFATQ9P243 1243 aa12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 TRMT6Q9UJA5 497 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-208ENST00000595726 ANK2Q01484 3957 aa12.71□□□□□ -0.38
SHKBP1-208ENST00000595726 TRGV5A0A0B4J1U4 118 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 GFYI3L273 518 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 WWP2O00308 870 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 GABRA1P14867 456 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 IMPA1P29218 277 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 FOXO1Q12778 655 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 CALCOCO2Q13137 446 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 HERC3Q15034 1050 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 DUPD1Q68J44 220 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 LRRC8EQ6NSJ5 796 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 HMBOX1Q6NT76 420 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 UGT3A1Q6NUS8 523 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 QSOX2Q6ZRP7 698 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 GK5Q6ZS86 529 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 ASB15Q8WXK1 588 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 NCLNQ969V3 563 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 THAP11Q96EK4 314 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 IL1RL2Q9HB29 575 aa12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 PNO1Q9NRX1 252 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 TUBA8Q9NY65 449 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 CORO1CQ9ULV4 474 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-208ENST00000595726 EML6Q6ZMW3 1958 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 SERPIND1P05546 499 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 SLC35G6P0C7Q6 338 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF888P0CJ79 500 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 ALOX12P18054 663 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 CEACAM8P31997 349 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 SKIV2L2P42285 1042 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 GPR143P51810 404 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 MEF2AQ02078 507 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 HECTD2Q5U5R9 776 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 PAQR3Q6TCH7 311 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 UBE2R2Q712K3 238 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 ALKBH8Q96BT7 664 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 PERPQ96FX8 193 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 MOCS1Q9NZB8 636 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 ADAMTS6Q9UKP5 1117 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 KIAA1549Q9HCM3 1950 aa12.69□□□□□ -0.38
SHKBP1-208ENST00000595726 NDUFS4O43181 175 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 ZBTB14O43829 449 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF354AO60765 605 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms