RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 CTAGE6Q86UF2 777 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 PHC2Q8IXK0 858 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 ZNF595Q8IYB9 648 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 LIX1Q8N485 282 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 GPATCH11Q8N954 259 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 CCDC89Q8N998 374 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 MORN4Q8NDC4 146 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 KIAA1191Q96A73 305 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 HSPBAP1Q96EW2 488 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 OR4K3Q96R72 315 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 SLC6A15Q9H2J7 730 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 SPNS1Q9H2V7 528 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 VTI1BQ9UEU0 232 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 BOKQ9UMX3 212 aaPredicted RBP9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 CLCA3PQ9Y6N3 262 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 MXRA5Q9NR99 2828 aa9.32□□□□□ -0.92
SMCO4P1-201ENST00000592909 ZANQ9Y493 2812 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 CTAGE9A4FU28 777 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 SH3D21A4FU49 640 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 MBD3L4A6NDZ8 208 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 MBD3L3A6NE82 208 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 MBD3L5A6NJ08 208 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 LRRC3CA6NJW4 275 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 CD8B2A6NJW9 211 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 C4orf51C9J302 202 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 HIST1H2AGP0C0S8 130 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PAMP19021 973 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 HIST1H2ADP20671 130 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 HNRNPFP52597 415 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 RAB38P57729 211 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 BTN3A2P78410 334 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 REEP5Q00765 189 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 CRYZQ08257 329 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 CSHL1Q14406 222 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PIGGQ5H8A4 983 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 ZNF470Q6ECI4 717 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PEX26Q7Z412 305 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PALM2Q8IXS6 379 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PM20D2Q8IYS1 436 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 TC2NQ8N9U0 490 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 ANKRD53Q8N9V6 530 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 TMEM52Q8NDY8 209 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 OR14A16Q8NHC5 309 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 MBD3L2Q8NHZ7 208 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PAQR8Q8TEZ7 354 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PTPMT1Q8WUK0 201 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 SLC5A11Q8WWX8 675 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 NEIL2Q969S2 332 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PYCR2Q96C36 320 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 NTNG2Q96CW9 530 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 HIST1H2AHQ96KK5 128 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 TIMP4Q99727 224 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 HIST1H2AJQ99878 128 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 WDR83Q9BRX9 315 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 H2AFJQ9BTM1 129 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 TSGA10Q9BZW7 698 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PRDM14Q9GZV8 571 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 AICDAQ9GZX7 198 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 PACSIN2Q9UNF0 486 aaPredicted RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 EIF3LQ9Y262 564 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 MRPS33Q9Y291 106 aaKnown RBP9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 NPFFR2Q9Y5X5 522 aa9.31□□□□□ -0.92
SMCO4P1-201ENST00000592909 C15orf38-AP3S2A0A0A6YYH1 394 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 EEF1E1-BLOC1S5C9J1V9 151 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CASKO14936 926 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 EEF1E1O43324 174 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CTNSO60931 367 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CNOT4O95628 575 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 IFNA16P05015 189 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 F7P08709 466 aaPredicted RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 FPR1P21462 350 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 RGS4P49798 205 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 AGFG1P52594 562 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 KCNJ2P63252 427 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 BASP1P80723 227 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CCZ1BP86790 482 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CCZ1P86791 482 aaPredicted RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 CDK16Q00536 496 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 DUSP8Q13202 625 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 ACKR1Q16570 336 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 TOR1AIP1Q5JTV8 583 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 HMBOX1Q6NT76 420 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 LYPD8Q6UX82 237 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 C4orf22Q6V702 233 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 DENND6AQ8IWF6 608 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 RASGEF1CQ8N431 466 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 ZNF321PQ8N8H1 164 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 NUBPLQ8TB37 319 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 EEF1AKMT1Q8WVE0 214 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 C1orf54Q8WWF1 131 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 SREK1Q8WXA9 508 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 RBM24Q9BX46 236 aaKnown RBP9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 ALOXE3Q9BYJ1 711 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 OR8D2Q9GZM6 311 aa9.3□□□□□ -0.92
SMCO4P1-201ENST00000592909 LACRTQ9GZZ8 138 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms