RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	SLC22A16	Q86VW1	577 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	MORN4	Q8NDC4	146 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	DAZL	Q92904	295 aa	Known RBP	14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	VPS39	Q96JC1	886 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	F2RL3	Q96RI0	385 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	SMC6	Q96SB8	1091 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	COPS7B	Q9H9Q2	264 aa	Predicted RBP	14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	CAB39L	Q9H9S4	337 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	SMYD2	Q9NRG4	433 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	DNAJC11	Q9NVH1	559 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	MOCS1	Q9NZB8	636 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	WWOX	Q9NZC7	414 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	GPRC5B	Q9NZH0	403 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	VTI1B	Q9UEU0	232 aa		14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	SETD2	Q9BYW2	2564 aa	Predicted RBP	14.29	□□□□□ -0.12
RFX2-223	ENST00000592883	C17orf105	B2RV13	164 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	TP73	O15350	636 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	KRT38	O76015	456 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	WISP3	O95389	354 aa	Predicted RBP	14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	HOXD4	P09016	255 aa	Predicted RBP	14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	TNNI3	P19429	210 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	CD22	P20273	847 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	CNR1	P21554	472 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	ACVR2A	P27037	513 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	HSPA7	P48741	367 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	DNASE1L1	P49184	302 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	RNF4	P78317	190 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	DR1	Q01658	176 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	ID2	Q02363	134 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	STX4	Q12846	297 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	DOC2A	Q14183	400 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	ZNF793	Q6ZN11	406 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	RTL4	Q6ZR62	310 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	RGS9BP	Q6ZS82	235 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	TMEM200A	Q86VY9	491 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	TMEM251	Q8N6I4	163 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	SNX31	Q8N9S9	440 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	OR10Q1	Q8NGQ4	319 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	OR14A16	Q8NHC5	309 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	SLC2A12	Q8TD20	617 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	NRGN	Q92686	78 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	MAPKAP1	Q9BPZ7	522 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	FAM173A	Q9BQD7	235 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	ZNF559	Q9BR84	538 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	MCMBP	Q9BTE3	642 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	CAPS2	Q9BXY5	557 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	TRIM31	Q9BZY9	425 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	PITHD1	Q9GZP4	211 aa	Predicted RBP	14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	DERL2	Q9GZP9	239 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	RHOJ	Q9H4E5	214 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	POPDC3	Q9HBV1	291 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	MTO1	Q9Y2Z2	717 aa	Known RBP	14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	FAM215A	Q9Y5M1	114 aa		14.28	□□□□□ -0.12
RFX2-223	ENST00000592883	RTCA	O00442	366 aa	Known RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	SEC31A	O94979	1220 aa	Known RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	IGHG3	P01860	377 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	CELA3A	P09093	270 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	CCL3	P10147	92 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	GGT5	P36269	586 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	ART1	P52961	327 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	RCN2	Q14257	317 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	EFTUD2	Q15029	972 aa	Known RBP eCLIP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	NDUFAF5	Q5TEU4	345 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	RTL6	Q6ICC9	239 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	GK5	Q6ZS86	529 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	CAPN12	Q6ZSI9	719 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	FAM47E	Q6ZV65	393 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	SYDE1	Q6ZW31	735 aa	Predicted RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	TRIL	Q7L0X0	811 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	UBE3D	Q7Z6J8	389 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	TCAIM	Q8N3R3	496 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	FAM109A	Q8N4B1	249 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	PTCD3	Q96EY7	689 aa	Known RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	TTYH2	Q9BSA4	534 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	EHD1	Q9H4M9	534 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	IL1RL2	Q9HB29	575 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	SEMA4B	Q9NPR2	832 aa	Predicted RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	SACM1L	Q9NTJ5	587 aa		14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	TUBA8	Q9NY65	449 aa	Predicted RBP	14.27	□□□□□ -0.13
RFX2-223	ENST00000592883	SPG11	Q96JI7	2443 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	ZFHX3	Q15911	3703 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883		A0A1B0GVC2	190 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	ATP6AP2	A0A1C7CYW4	349 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	OR14I1	A6ND48	311 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	SYNDIG1L	A6NDD5	238 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	FIGNL2	A6NMB9	653 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883		E7ESA3	106 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	BCKDK	O14874	412 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	PHGDH	O43175	533 aa	Known RBP	14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	KLK8	O60259	260 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	SH3BGRL	O75368	114 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	STK16	O75716	305 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	ATP6AP2	O75787	350 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	ETHE1	O95571	254 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	CCDC166	P0CW27	439 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	GLI4	P10075	376 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	CD1D	P15813	335 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	TCP1	P17987	556 aa	Known RBP	14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	EPOR	P19235	508 aa		14.26	□□□□□ -0.13
RFX2-223	ENST00000592883	HPD	P32754	393 aa	Predicted RBP	14.26	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms