RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	ANKRD9	Q96BM1	317 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	NUDT11	Q96G61	164 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	BTBD9	Q96Q07	612 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	DRC3	Q9H069	523 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SLC6A15	Q9H2J7	730 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	METTL17	Q9H7H0	456 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	COG4	Q9H9E3	785 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	HPF1	Q9NWY4	346 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PACSIN3	Q9UKS6	424 aa		6.14	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ARHGAP21	Q5T5U3	1957 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	GLYATL1P3	A0A0U1RQE8	302 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727		A0A1W2PP18	115 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PES1	O00541	588 aa	Known RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	KPNA5	O15131	536 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	EPHB6	O15197	1021 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	FOXS1	O43638	330 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	B4GALT2	O60909	372 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ENO2	P09104	434 aa	Predicted RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TNFRSF1A	P19438	455 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	FMO4	P31512	558 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	UGT2B10	P36537	528 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TRPC1	P48995	793 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SSR4	P51571	173 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	HILS1	P60008	231 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	MPP1	Q00013	466 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RPA4	Q13156	261 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ITGA9	Q13797	1035 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RNF187	Q5TA31	235 aa	Predicted RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TAF3	Q5VWG9	929 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ZDHHC20	Q5W0Z9	365 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	LRRC8B	Q6P9F7	803 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	WDR59	Q6PJI9	974 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	FAM47E	Q6ZV65	393 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TAX1BP1	Q86VP1	789 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	GPALPP1	Q8IXQ4	340 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TBC1D21	Q8IYX1	336 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	C2orf73	Q8N5S3	287 aa	Predicted RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CSNK1A1L	Q8N752	337 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	FAM71B	Q8TC56	605 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	DTX3L	Q8TDB6	740 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	FBXW5	Q969U6	566 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RBMXL1	Q96E39	390 aa	Known RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CCDC34	Q96HJ3	373 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TEKT5	Q96M29	485 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ZFP3	Q96NJ6	502 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TMEM204	Q9BSN7	226 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	MMP27	Q9H306	513 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CALHM2	Q9HA72	323 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.13	□□□□□ -1.43	9e-7	■■■■■ 30.9
ATP6V0A1-222	ENST00000589727	ADAM29	Q9UKF5	820 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CFAP45	Q9UL16	551 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CAMK2A	Q9UQM7	478 aa		6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RUVBL1	Q9Y265	456 aa	Known RBP	6.13	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	LRRC14B	A6NHZ5	514 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727		H0YGG7	62 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	C16orf97	H3BN30	126 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CDC7	O00311	574 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PPP1R12A	O14974	1030 aa	Predicted RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SGTA	O43765	313 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PNMA6A	P0CW24	399 aa	Predicted RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	APEH	P13798	732 aa	Known RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SLC9A1	P19634	815 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PKLR	P30613	574 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CCKAR	P32238	428 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	XCR1	P46094	333 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	AVPR1B	P47901	424 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	HCAR3	P49019	387 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	DNASE1L1	P49184	302 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	PRLHR	P49683	370 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ARF3	P61204	181 aa	Predicted RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	KCNJ2	P63252	427 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	EEF1A1	P68104	462 aa	Known RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	NOMO3	P69849	1222 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	GGTLC2	Q14390	218 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	BECN1	Q14457	450 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ICAM4	Q14773	271 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	EEF1A1P5	Q5VTE0	462 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CD276	Q5ZPR3	534 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TMCO3	Q6UWJ1	677 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	IL20RB	Q6UXL0	311 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	EML6	Q6ZMW3	1958 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	USP43	Q70EL4	1123 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RNF44	Q7L0R7	432 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	RASGEF1C	Q8N431	466 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ZNF525	Q8N782	197 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SNX31	Q8N9S9	440 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	LINC01555	Q8NAE3	123 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	OR51Q1	Q8NH59	317 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ASB15	Q8WXK1	588 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TSLP	Q969D9	159 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	UCN3	Q969E3	161 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	KISS1R	Q969F8	398 aa	Predicted RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CAVIN3	Q969G5	261 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	INTS12	Q96CB8	462 aa	Known RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	DCUN1D1	Q96GG9	259 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	ADAD1	Q96M93	576 aa	Known RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SRPK1	Q96SB4	655 aa	Known RBP	6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	TIMP4	Q99727	224 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	CRACR2A	Q9BSW2	395 aa		6.12	□□□□□ -1.43
ATP6V0A1-222	ENST00000589727	SPATA9	Q9BWV2	254 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms