RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZWINTO95229 277 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 TBX6O95947 436 aaPredicted RBP12.96□□□□□ -0.33
VMP1-209ENST00000588915 GLI4P10075 376 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 DNAJA1P31689 397 aaKnown RBP12.96□□□□□ -0.33
VMP1-209ENST00000588915 GGT5P36269 586 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 HNRNPFP52597 415 aaKnown RBP12.96□□□□□ -0.33
VMP1-209ENST00000588915 HK2P52789 917 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 PLA2G16P53816 162 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 FOLH1Q04609 750 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 STX4Q12846 297 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 MYBPHQ13203 477 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SLC10A1Q14973 349 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 MPEG1Q2M385 716 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 ZNF750Q32MQ0 723 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
VMP1-209ENST00000588915 TMEM200AQ86VY9 491 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 ZC3HC1Q86WB0 502 aaKnown RBP12.96□□□□□ -0.33
VMP1-209ENST00000588915 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SARAFQ96BY9 339 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 WDR34Q96EX3 536 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SCYL1Q96KG9 808 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 FOXC2Q99958 501 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 LYRM4Q9HD34 91 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 NSMCE4AQ9NXX6 385 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 A0A0G2JN53 185 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FAM95CA0A1B0GW59 222 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 NPEPPSL1A6NEC2 478 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CLGNO14967 610 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 P04436 131 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CD99P14209 185 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 GABRA1P14867 456 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 GDF5P43026 501 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 KCNC1P48547 511 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 MAN2A2P49641 1150 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 TAS2R39P59534 338 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 RNF4P78317 190 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 MGAT5Q09328 741 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FOXO1Q12778 655 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 LAPTM5Q13571 262 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 TGFBIQ15582 683 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 WLSQ5T9L3 541 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 RTL6Q6ICC9 239 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FAM47EQ6ZV65 393 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 SYDE1Q6ZW31 735 aaPredicted RBP12.95□□□□□ -0.34
VMP1-209ENST00000588915 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CHDHQ8NE62 594 aaPredicted RBP12.95□□□□□ -0.34
VMP1-209ENST00000588915 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 KCNC2Q96PR1 638 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 TBCDQ9BTW9 1192 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 EFCAB11Q9BUY7 163 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 DERL2Q9GZP9 239 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CNOT10Q9H9A5 744 aaKnown RBP12.95□□□□□ -0.34
VMP1-209ENST00000588915 COPS7BQ9H9Q2 264 aaPredicted RBP12.95□□□□□ -0.34
VMP1-209ENST00000588915 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
VMP1-209ENST00000588915 PRDM7Q9NQW5 492 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 MOCS1Q9NZB8 636 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 ACAD8Q9UKU7 415 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 CHMP2BQ9UQN3 213 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 L3MBTL1Q9Y468 752 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 FAM215AQ9Y5M1 114 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 SPACA6W5XKT8 324 aa12.95□□□□□ -0.34
VMP1-209ENST00000588915 A0A0G2JNJ9 132 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 C17orf105B2RV13 164 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 TNNI3P19429 210 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 CERS1P27544 350 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 MAGEA5P43359 124 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 NR0B1P51843 470 aaKnown RBP12.94□□□□□ -0.34
VMP1-209ENST00000588915 IST1P53990 364 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 TSNQ15631 228 aaKnown RBP12.94□□□□□ -0.34
VMP1-209ENST00000588915 PIGGQ5H8A4 983 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 PAGE2BQ5JRK9 111 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 VN1R5Q7Z5H4 357 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 CLNKQ7Z7G1 428 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 DND1Q8IYX4 353 aaKnown RBP12.94□□□□□ -0.34
VMP1-209ENST00000588915 SLC15A4Q8N697 577 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 NUBPLQ8TB37 319 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 SLC2A12Q8TD20 617 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 PTCD3Q96EY7 689 aaKnown RBP12.94□□□□□ -0.34
VMP1-209ENST00000588915 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 OR8D2Q9GZM6 311 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 DDX47Q9H0S4 455 aaKnown RBP12.94□□□□□ -0.34
VMP1-209ENST00000588915 RHOJQ9H4E5 214 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 QPCTLQ9NXS2 382 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
VMP1-209ENST00000588915 Q9UFV3 132 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms