RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 PLEKHN1Q494U1 663 aaPredicted RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 UNC50Q53HI1 259 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 CRB2Q5IJ48 1285 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 CATSPEREQ5SY80 951 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 B3GNTL1Q67FW5 361 aaPredicted RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 RINLQ6ZS11 566 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 FRA10AC1Q70Z53 315 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 ABHD13Q7L211 337 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 KCT2Q8NC54 265 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 FAM13CQ8NE31 585 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 PLPP5Q8NEB5 264 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 AGR3Q8TD06 166 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 METTL21AQ8WXB1 218 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 THOC3Q96J01 351 aaKnown RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 MAELQ96JY0 434 aaKnown RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 IMMP1LQ96LU5 166 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 EGFL8Q99944 293 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 WDR77Q9BQA1 342 aaPredicted RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 YIPF2Q9BWQ6 316 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 CADM1Q9BY67 442 aaKnown RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 NUF2Q9BZD4 464 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 EPS8L2Q9H6S3 715 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 MKL2Q9ULH7 1088 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 VPS4AQ9UN37 437 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 MRPS2Q9Y399 296 aaKnown RBP11.67□□□□□ -0.54
ERCC2-207ENST00000586441 FLNCQ14315 2725 aa11.67□□□□□ -0.54
ERCC2-207ENST00000586441 NPEPPSL1A6NEC2 478 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 E9PBE3 544 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 UBXN8O00124 270 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 NDUFS4O43181 175 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 KLK8O60259 260 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 GALR3O60755 368 aaPredicted RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 CIB2O75838 187 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 MLYCDO95822 493 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 FGF4P08620 206 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PRR35P0CG20 571 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 C8orf89P0DMQ9 161 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 SMIM10L1P0DMW3 83 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 ALOX12P18054 663 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 KCNC1P48547 511 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 Q0VFX4 171 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 CDC16Q13042 620 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 E2F2Q14209 437 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PDCD2Q16342 344 aaPredicted RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PFKFB4Q16877 469 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 LSM12Q3MHD2 195 aaKnown RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 NXNQ6DKJ4 435 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 SLCO4C1Q6ZQN7 724 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 CLYBLQ8N0X4 340 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 KRT78Q8N1N4 520 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PDPRQ8NCN5 879 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 ZNF740Q8NDX6 193 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PSMF1Q92530 271 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 EXT2Q93063 718 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 WDR34Q96EX3 536 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 SMIM10Q96HG1 83 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 OR52B2Q96RD2 323 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 C1QTNF3Q9BXJ4 246 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 SLC29A3Q9BZD2 475 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 SLC6A16Q9GZN6 736 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 VN1R1Q9GZP7 353 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 MEAF6Q9HAF1 191 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 ZNF160Q9HCG1 818 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 NDE1Q9NXR1 346 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 NUDT4Q9NZJ9 180 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 TRAF6Q9Y4K3 522 aa11.66□□□□□ -0.54
ERCC2-207ENST00000586441 TNPO3Q9Y5L0 923 aaKnown RBP11.66□□□□□ -0.54
ERCC2-207ENST00000586441 MAGEB17A8MXT2 336 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 SDHDO14521 159 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 STK16O75716 305 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 KLHL18O94889 574 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 COX4I1P13073 169 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 MTHFD2P13995 350 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 IL1RNP18510 177 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 JAK1P23458 1154 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 CASP2P42575 452 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 TSFMP43897 325 aaKnown RBP11.65□□□□□ -0.54
ERCC2-207ENST00000586441 XCR1P46094 333 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 RAPSNQ13702 412 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 PCOLCEQ15113 449 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 TLR1Q15399 786 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 SYT16Q17RD7 645 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 PLAG1Q6DJT9 500 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 H3F3CQ6NXT2 135 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 TMIGD1Q6UXZ0 262 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 CPEB2Q7Z5Q1 589 aaKnown RBP11.65□□□□□ -0.54
ERCC2-207ENST00000586441 PDSS2Q86YH6 399 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 PRSS58Q8IYP2 241 aa11.65□□□□□ -0.54
ERCC2-207ENST00000586441 ANKRD53Q8N9V6 530 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms