RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF793Q6ZN11 406 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 GALNTL5Q7Z4T8 443 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 CEP112Q8N8E3 955 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 HUS1BQ8NHY5 278 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 DAZLQ92904 295 aaKnown RBP16.68■□□□□ 0.26
SRSF1-209ENST00000585096 NCLNQ969V3 563 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ISL2Q96A47 359 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 TMEM125Q96AQ2 219 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 RGMAQ96B86 450 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 HES7Q9BYE0 225 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ALOXE3Q9BYJ1 711 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 OR51B5Q9H339 312 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 IPPKQ9H8X2 491 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF180Q9UJW8 692 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ASPDHA6ND91 283 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 POC1B-GALNT4F8VUJ3 575 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 H0YIV9 168 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 SAP18O00422 153 aaKnown RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 ZFAND5O76080 213 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 COL6A2P12110 1019 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 TNNI3P19429 210 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 CPN2P22792 545 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 PTX3P26022 381 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 MAGEA12P43365 314 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 GPR143P51810 404 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 ARFIP1P53367 373 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 ALDH6A1Q02252 535 aaKnown RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 TSNAXIP1Q2TAA8 658 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 KRTCAP3Q53RY4 240 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 TECRLQ5HYJ1 363 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF468Q5VIY5 522 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 C1QL3Q5VWW1 255 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 GOLGA7Q7Z5G4 137 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 PLD6Q8N2A8 252 aaKnown RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 TMEM156Q8N614 296 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 PTGR2Q8N8N7 351 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-209ENST00000585096 RELTQ969Z4 430 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 SCYL1Q96KG9 808 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 MAPKAP1Q9BPZ7 522 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 DMRT3Q9NQL9 472 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 MS4A12Q9NXJ0 267 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 VTI1BQ9UEU0 232 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 POLEQ07864 2286 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 DOPEY1Q5JWR5 2465 aa16.67■□□□□ 0.26
SRSF1-209ENST00000585096 TRGV8A0A0C4DH27 118 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 NME2P1O60361 137 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 CLDN1O95832 211 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 NME2P22392 152 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 SRSF11Q05519 484 aaKnown RBP16.66■□□□□ 0.26
SRSF1-209ENST00000585096 SLAMF1Q13291 335 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 CPSF6Q16630 551 aaKnown RBP eCLIP16.66■□□□□ 0.26
SRSF1-209ENST00000585096 LGSNQ5TDP6 509 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-209ENST00000585096 FJX1Q86VR8 437 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 IFT20Q8IY31 132 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 MORN4Q8NDC4 146 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 OR14A16Q8NHC5 309 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 THAP3Q8WTV1 239 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-209ENST00000585096 ATP6V1E2Q96A05 226 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 FRMD6Q96NE9 622 aa16.66■□□□□ 0.26
SRSF1-209ENST00000585096 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
SRSF1-209ENST00000585096 SPTBN1Q01082 2364 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 LRRC14BA6NHZ5 514 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 STX16-NPEPL1H3BU86 382 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 STX16O14662 325 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 LDB3O75112 727 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 SMIM24O75264 130 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 ITGA10O75578 1167 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 SIX3O95343 332 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 CLDN9O95484 217 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 TLX1P31314 330 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 ARL1P40616 181 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 CASP6P55212 293 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 RPS13P62277 151 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 BIKQ13323 160 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 HSDL2Q6YN16 418 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 ZCCHC7Q8N3Z6 543 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 L3MBTL4Q8NA19 623 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 UHMK1Q8TAS1 419 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 PTPMT1Q8WUK0 201 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 DCAKDQ8WVC6 231 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 PHF21BQ96EK2 531 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 GPR137Q96N19 417 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF358Q9NW07 568 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 PSD3Q9NYI0 1048 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 SUCOQ9UBS9 1254 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 PHF11Q9UIL8 331 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF223Q9UK11 482 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 NFU1Q9UMS0 254 aa16.65■□□□□ 0.26
SRSF1-209ENST00000585096 KLF13Q9Y2Y9 288 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 YARS2Q9Y2Z4 477 aaKnown RBP16.65■□□□□ 0.26
SRSF1-209ENST00000585096 HIVEP3Q5T1R4 2406 aa16.64■□□□□ 0.25
SRSF1-209ENST00000585096 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.25
SRSF1-209ENST00000585096 C17orf105B2RV13 164 aa16.64■□□□□ 0.25
SRSF1-209ENST00000585096 TRIM49D1C9J1S8 452 aa16.64■□□□□ 0.25
SRSF1-209ENST00000585096 NPIPA5E9PKD4 350 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms